Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g02222 ATGGTCAAGAGAAAGCAGCAATCCCTTCAACAATTATTGTCAATTACATTTGCATGTGTCTTGCTATCACTTTGCTCCTCAGTTGCTCCTTCTCAGCCTGTCTTGCATAGTCCTCCACCTGCATTTCCTTTCTTGTTACCTTCTGATGCCCTTGCGCTTCTCGCATTTAAATCCAAAGCTGATCTCAAGGACCACCTCTACTTCTCTACCAACACTTCCGGCTTCCATTTTTGCCAATGGCAAGGTGTCAAATGCAATGGACAGAAAGTAGTTCGCCTAGTTCTCCAGGGTTTAGATCTCGGTGGTATTCTGGGTGCGGACACCTTGTCCCGTCTTGACCAGCTTCGTGTGCTGAGTTTGCAGAATAACTCCCTCACTGGACCCATACCGGACCTCTCTGGTCTTGTGAATCTTAAAAGCCTCTTCCTTGATAATAACTACCTCACAGGTTCTTTCCCTCCTTCAATCCTCTCTCTTCATAGACTTCGGACCTTAGATTTGTCCCACAACAATTTTTCTGGTCCCATTCCCGCCCGGTTAGCCAAGCTAGACCGCTTCTATTACATCCGGCTCAGTTGGAATAGGTTCAATGGAAGCATTCCTCCACTCAACCAGTCTGCTCTCCGAACATTCGATGTCTCTGGTAACAATCTTACTGGTGCCATTCCTGTCACACCCACTTTGCTTCGTTTTGGGTATTCTTCTTTCTCTTCCAACCCAGGCCTCTGTGGCGAAATCATTCACAAGGAATGCCACCCAAGCGCCCCTTTCTTCGGGCCAACGGCGCCAGTCGTGGCAGCCTCACCGCCTGCGGTCGGACTTGGGCAGAGCGCGCAAGTCCATGGCGTCAATGGCTTAATCCACCAACCATACAACAAAAAACACAACTCAATAACAGTGACTATAGGGTTCTCAGCAGGGGTTTGTGTTCTGATAGTGTCGCTTATCTGTTTTGTGGTTACCGTGAAGAAACAGAGGAACAAGAAGGATACTTCAAGGGGTATGATGACTTCGGATGCGATGGCGACTGCTGAAGCGGCGGTGGTAATGCAAATGGAGCAAGAGAAGGAACTGGAGGAGAAGGTGAAGAGAGCGCAAGTTGCCAAGAGCGGGAGTTTAATATTCTGTGCAGGGGAGGCTCAGCTATATTCACTGGATCAGTTGATGAGAGCCTCTGCGGAGCTATTGGGAAGAGGGTCTTTAGGGACCACGTACAAAGCAGTGTTAGATAACCGTCTGATCGTCACTGTAAAGCGGCTTGATGCTGGTAAAATGGCTGCTGGCTCAACCAGGGAAATGTTCGAGCGACACATGGAATCAGTGGGTGGCCTTCGCCATCCCAATTTGGTTCCGCTAAGGGCCTATTTCCAGGCTAAAGATGAGAGGCTTCTTATCTATGACTACCAGCCAAATGGCAGTGTATTCTCCCTCATCCACGGTTCCAAGTCAAGCAGGGCAAGACCATTGCACTGGACATCGTGCTTAAAAATAGCAGAAGACGTAGCACAAGGGCTGTCTTACATCCACCAAGCATGGAGATTAGTCCACGGCAATCTCAAGTCTTCCAATGTTCTGCTTGGACCTGATTTTGAGGCATGCATCACCGATTACTGCTTATCTGTGTTGGTCAGCCCATCTAGCTTTGAGGAGCACCCTGATTCTGCAGCATACAGAGCACCAGAGATTCGCAATCCAAATAACCACCCAAGTACAAAATCGGACGTTTATGCCTATGGGATTTTGTTGTTAGAACTTCTGACGGGGAAGCCTCCTTCAGAGCACCCATTCTTGGCGCCCAGTGATATGGTTGCGTGGGTCAAATCCATCAGGGAAGACAATGGAGGCGAAGACAACAGAATGGACATGCTGCTTGATGTAGCTACTACGTGTAGCTTGACCTCGCCTGAGCAGAGACCCACTATGTGGCAGGTCTTGAAGATGTTGCAGGAAATTAAAGAGATTGTATTATTGGAGGACAATGAATTGGACCTACGCACTGCCATGTCCTAA 2010 0.4856 MVKRKQQSLQQLLSITFACVLLSLCSSVAPSQPVLHSPPPAFPFLLPSDALALLAFKSKADLKDHLYFSTNTSGFHFCQWQGVKCNGQKVVRLVLQGLDLGGILGADTLSRLDQLRVLSLQNNSLTGPIPDLSGLVNLKSLFLDNNYLTGSFPPSILSLHRLRTLDLSHNNFSGPIPARLAKLDRFYYIRLSWNRFNGSIPPLNQSALRTFDVSGNNLTGAIPVTPTLLRFGYSSFSSNPGLCGEIIHKECHPSAPFFGPTAPVVAASPPAVGLGQSAQVHGVNGLIHQPYNKKHNSITVTIGFSAGVCVLIVSLICFVVTVKKQRNKKDTSRGMMTSDAMATAEAAVVMQMEQEKELEEKVKRAQVAKSGSLIFCAGEAQLYSLDQLMRASAELLGRGSLGTTYKAVLDNRLIVTVKRLDAGKMAAGSTREMFERHMESVGGLRHPNLVPLRAYFQAKDERLLIYDYQPNGSVFSLIHGSKSSRARPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACITDYCLSVLVSPSSFEEHPDSAAYRAPEIRNPNNHPSTKSDVYAYGILLLELLTGKPPSEHPFLAPSDMVAWVKSIREDNGGEDNRMDMLLDVATTCSLTSPEQRPTMWQVLKMLQEIKEIVLLEDNELDLRTAMS 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g02222 669 Gene3D Transferase(Phosphotransferase) domain 1 470 663 - -
Bach3g02222 669 ProSiteProfiles Protein kinase domain profile. 390 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach3g02222 669 Pfam Protein kinase domain 393 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach3g02222 669 SUPERFAMILY Protein kinase-like (PK-like) 394 653 IPR011009 -
Bach3g02222 669 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Bach3g02222 669 ProSiteProfiles Leucine-rich repeat profile. 114 136 IPR001611 GO:0005515
Bach3g02222 669 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 22 652 IPR046959 -
Bach3g02222 669 Coils Coil 341 361 - -
Bach3g02222 669 Gene3D Ribonuclease Inhibitor 47 205 IPR032675 -
Bach3g02222 669 Gene3D Ribonuclease Inhibitor 206 255 IPR032675 -
Bach3g02222 669 FunFam Nuclear pore complex protein NUP107 47 202 - -
Bach3g02222 669 Pfam Leucine rich repeat N-terminal domain 47 86 IPR013210 -
Bach3g02222 669 SUPERFAMILY L domain-like 46 244 - -
Bach3g02222 669 Pfam Leucine rich repeat 137 196 IPR001611 GO:0005515
Bach3g02222 669 Gene3D Phosphorylase Kinase; domain 1 354 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g02222 Bach-Chr3 29169336 29172121 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g02222 49 669 Receptor kinase-like Gene Family AT5G43020 60.972 0.0 748
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Bach3g02222 Pkinase 6e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g02222 - - qsa:O6P43_016036 987.638