Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g02220 ATGGCTGTGGAGCTTGTAACGGGTTATGGGGATGGGGATGGGGATGATAGGTTTGCAGCGACGCCGGAAGACAATGCGAGTGCGGCGCAGGAAGCAGCTGCTGCGGGTATTCATAGCGTTGAGAAACTCATGACTATGATTTCTCAAAAGCAGGAAGAAGCATCTAACTCACAAGGAGGGGCTTCGGAATTCGGAGCTGTTGCGGATGTGGCCGTGAACAAGTTCAGAAAGTTTATTTCTCTTCTTGACAGACCAAGAATCGGTCATGCTCGTTTCAGAAAGGCTCCTGTAGCTGCATTAACCACTCCGCCATCTATTCCTCTCGTGCAATTACAGCAGATTGTAGATTCAGAATCAAAAGTGCCTTCTCTTGTGCAGCATCAACAAAAGAAAACAGAACAAGTCTCTGCTTTCAAGGTTTATTCTCCTGCATCGGTTCTACGTCTACCCCCTCTGCCTCAAAATCACCACCAGCTGCAGCAACCCTTCTCCTTTCATTCTCATCACCAACTCAATCTGGGCTCTGCTTCTGTTCCAGCTAACAACGGATTTGTAGAGAAGAGAGACGCACATGGCACATTCAAAATCTCGGCCTCTCCATCGGTTTCTAAGGCCAATTCTTATATGTCTTCCTTGACAGGGGAAACTGATAGTATGGCACATCCCTCTCGTTCATCTGGATTTCAATTTACACAAATGTCTTTGTCACAGCAAGGGTCTTATATGCGTAAGCCACCTCTGTCTTCATCTTCTATCAAGAGGAAGTGCAACTCAATGGACGATACTGCCCTCAAGTGTGCATCTTCTTCTGGGCGTTGCCATTGCTCCAAGAAAAGGAAATCCAAGATTAGGAGGGTGGTAAGAGTACCAGCAATTAGCTCCAAGATTGCTGATATTCCGCCAGATGACTACTCGTGGAGAAAATACGGACAGAAACCTATCAAGGGCTCTCCCCATCCCAGAGGTTATTACAAGTGTAGCAGTGTGAGAGGATGCCCAGCACGTAAACACGTCGAGCGTGCTTTGGACGAACCTACCATGCTTATTGTCACGTACGAGGGAGATCATAATCATGCCCGCACCGCTTCTGATCTAGCACCTGCTGTCGTTCTGGAATCATCTTAG 1125 0.4747 MAVELVTGYGDGDGDDRFAATPEDNASAAQEAAAAGIHSVEKLMTMISQKQEEASNSQGGASEFGAVADVAVNKFRKFISLLDRPRIGHARFRKAPVAALTTPPSIPLVQLQQIVDSESKVPSLVQHQQKKTEQVSAFKVYSPASVLRLPPLPQNHHQLQQPFSFHSHHQLNLGSASVPANNGFVEKRDAHGTFKISASPSVSKANSYMSSLTGETDSMAHPSRSSGFQFTQMSLSQQGSYMRKPPLSSSSIKRKCNSMDDTALKCASSSGRCHCSKKRKSKIRRVVRVPAISSKIADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDEPTMLIVTYEGDHNHARTASDLAPAVVLESS 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g02220 374 ProSiteProfiles WRKY domain profile. 295 361 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bach3g02220 374 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 29 364 IPR044810 GO:0003700
Bach3g02220 374 SUPERFAMILY WRKY DNA-binding domain 298 359 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bach3g02220 374 Pfam WRKY DNA -binding domain 302 358 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bach3g02220 374 Gene3D WRKY domain 288 360 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bach3g02220 374 SMART WRKY_cls 300 360 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bach3g02220 374 FunFam WRKY transcription factor 65 284 361 - -
Bach3g02220 374 Pfam Plant zinc cluster domain 253 298 IPR018872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g02220 Bach-Chr3 29157544 29158933 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g02220 19 321 WRKY Transcription Factor Family AT4G24240 48.220 6.25e-68 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bach3g02220 WRKY 2.8e-25 CL0274