Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g02203 ATGGGGAGAGTGAAGCCTCAGATCAAGAAGATTGAGAACACAACGAATAGGCAAGTCACTTTCTCAAAGAGGAGGAATGGGCTCATCAAGAAAGCTTATGAGCTTTCTGTTCTTTGTGACGTTGATGTAGCTCTAATCATGTTTTCTCCATCTGGGAGAGCCAGTCTCTTCTCTGGTTCCAAAAGCATTGAGGAAATTCTTGAACGATATGTTAATCTTCCTCCGCAAGAACGTGGAAGGATGCATAACCAAGAGGTAAGTAATTCAGCCCTGACTAGAAGTCATATAATTGTAGATATGGTGCAGTCGAGCCACCAATATTACAATTATATATGGGACATTCAAAGGGAAATTTTTATTTGCAAAACTCAATTGGAAGAAATGGAAAAGCGGCTGAGAATATTCGAAGATGATCCATCTGAAATCACAATACTGTGTGAAGCTGAATATCGCGAACAAGTCCTTCAGGAAACTCTTAGACGAGTGCAGCTACGAAAAGTGCATCTTGCAAAAACTGTAGAAGCAAATGGATTTGTTGCTGGAAGCTCAAAGAACTTCACAGACTGGCTTCCCCATGGAGACCCGCAATCTCAGATTACAAACTTTGTGGATATCAATAGCCTTGTATCTCTGAGGGATCAACAAGTGCATGCTGTTGCTGATATTATATCTCCAGCTTCATCACTTCTTCACGCACACAACTTAGACGATCAAGATGGTCAACTGAGCCCGAGGAATGGCTTAGAAAATGACAATAATGACGTAGAGGGCCCTGAGTTTGGACAAGTCGTCAATAACCTCAACTCTTCCCATTGA 816 0.4167 MGRVKPQIKKIENTTNRQVTFSKRRNGLIKKAYELSVLCDVDVALIMFSPSGRASLFSGSKSIEEILERYVNLPPQERGRMHNQEVSNSALTRSHIIVDMVQSSHQYYNYIWDIQREIFICKTQLEEMEKRLRIFEDDPSEITILCEAEYREQVLQETLRRVQLRKVHLAKTVEANGFVAGSSKNFTDWLPHGDPQSQITNFVDINSLVSLRDQQVHAVADIISPASSLLHAHNLDDQDGQLSPRNGLENDNNDVEGPEFGQVVNNLNSSH 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g02203 271 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Bach3g02203 271 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Bach3g02203 271 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Bach3g02203 271 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Bach3g02203 271 FunFam Agamous-like MADS-box protein AGL66 isoform A 14 79 - -
Bach3g02203 271 MobiDBLite consensus disorder prediction 236 271 - -
Bach3g02203 271 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Bach3g02203 271 PANTHER MADS BOX PROTEIN 3 132 - -
Bach3g02203 271 Gene3D - 13 111 IPR036879 GO:0003677|GO:0046983
Bach3g02203 271 CDD MADS_MEF2_like 2 72 IPR033896 GO:0000977|GO:0045944
Bach3g02203 271 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 54 IPR002100 GO:0003677|GO:0046983
Bach3g02203 271 SUPERFAMILY SRF-like 2 83 IPR036879 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g02203 Bach-Chr3 29033291 29035463 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g02203 1 191 Type I MADS-box Gene Family AT1G22130 42.857 1.34e-42 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Bach3g02203 SRF-TF 1.5e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g02203 - - cam:101506754 301.597