Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g02179 ATGGCTTCTCAGCGTAGCTCTAAAGGCGACATTGTCTATATTGAACCCGAATATTGCCCTCAAGCAGTGATCGACTGGTATGCTCAAACTGGTGGAGATGATGAGTATAAGCGCCACACTACCATGTCCACGACCTCCAATAGTAAGTCCGCCTTGACCTTAAAAGCCAAAAAGCATCTCTCTGCTTTGGGGTGGGTTTTCTGGTTGGCTGACAAGAATGGAAGGAAGGAATTGCGTTATAAATCACCCATCAATGGCAAGAATTATTACTCTCTCAAAACGGCATGCAAAAGTCTTATAGAAGAGGGAGCAATATCAATAGGATCTGAGTCTGAAAGCGTTACTACCCCCAACCACGAATCCCTGCCTCACATTACTCCGGTTCCTCAAGTTGAGTGCCATTTGATTGAAAAAATATCATCTTGTGATGAAAACCAGACTAGTTTACAAACACTTGCTATCACGCAGCAGCCAAGAAGAGGCAGGAAAAGAAAGAAAGAACCTTTATCAGGTAATGCATGTTCAGTGAATCAATCACAATCACAAGTTCAATTAGATGGTTTGAGTTGTGTTGGAGGTGAAAAAAGGGATAGACATATACGATCAAGAAAAAGAGTGAGGAAGTGCATTGTTTCTTGTTTGATGGACGAGAAAGTGGTATTGCCTGGAGCAAAAGTGCATTGTAGTGGGAAAAATAAGGAATTGAAGGAAGGGAGGCTCTTTAGTCAGGGAATCGAGTGTGATTGTTGTTGTAAGATGTTTACACTGACTGGCTTTGAAGCTCATGCTGGTAGCACCAAACACAGACCCGCAGCCAATATCTTCTTGGAAGATGGGAGGTCACTGTCGGATTGTCAGAAGGAAGCTTGGCAGAATAACAAAACGGAAGGCTTGAATACAAATGCTGGGAGAAAGGTTTTGATCAATCAAAATAGGGAACCGGATCAGAACGATAGCATTTGCTCTTTTTGTCATAATGGCGGCGAATTGATTCTCTGTGATCGATGTCCATCCTCATTCCATCTAAGCTGCTTGGGTCTCAAGGAACTCCCTGATGGTGATTGGTTCTGCCCATCATGCTGTTGCAAAATTTGCAGCCACTACAGCTGCAAACATGTGAATGCAGATTCTGTGGATAATAGCATTCTCGTTTGTGACCAATGTGAGCGTAAATATCACATTGTGTGCCGAAAAAGTAAAGGATTTACAGAGCTGAATGAAAATGAAAATGAACATTGGCTCTGCAGCAGAGAGTGTGAGAATATATTTAATGGCCTACAGAAGCTGGTAGGAAAACCGATTCCTGTGGCTGGACAAGATCTAACTCTGACATTGTTGAAGACCATGAAAGCCCAAAGCTCCGCGAATATTGATTGTGATCCCGAGGCCTTGACACAGATTGAAAGCAAGCTTAGTGTGGCTCTTGAATTAATGCATGAGTGTTTCGAGCCAGTCATTGAAGCTTTCACCGGGACAGATCTTGTAGAAGATGTTATTTTCAGTAAAAGTTCAAAACTTGGTCGTTTGAACTTCAAAGGGTTCTACACCGTGATTCTAGAAAAGAACGATGAAGTGGTTACTGTTGCGAGTGTGAGAGTTTTTGGGCCGACGGTTGCAGAAGTGCCTCTTGTGGCCACCAAGTTCCAGTTTCGAAGACTTGGAATGTGTACTGTTTTGATGCGAGAGCTTGAGAAGAAGCTGATTGAGTTAGGTGTAGAGAGGATAACTTTGCCTGCTGTTCATGGCATGCTTAAAACTTGGACAAGTTCGTTTGGCTTTGCAAAGATGAGTGACTATGAGAGGTCACTATTTCTCGATTACCCTTTCTTGGTCTTCGGGGATACCATCACGTGCCAGAAACCTTTAGGGAAACCTTCAATCGAAGAAAGAGCAGTGAGACCTAAACCTTGCACGGATCTGCACCAGAACCATCTTATGTCGACCTCGGTGAGTTGCATCACTGAAACTTGTCACTAG 1977 0.433 MASQRSSKGDIVYIEPEYCPQAVIDWYAQTGGDDEYKRHTTMSTTSNSKSALTLKAKKHLSALGWVFWLADKNGRKELRYKSPINGKNYYSLKTACKSLIEEGAISIGSESESVTTPNHESLPHITPVPQVECHLIEKISSCDENQTSLQTLAITQQPRRGRKRKKEPLSGNACSVNQSQSQVQLDGLSCVGGEKRDRHIRSRKRVRKCIVSCLMDEKVVLPGAKVHCSGKNKELKEGRLFSQGIECDCCCKMFTLTGFEAHAGSTKHRPAANIFLEDGRSLSDCQKEAWQNNKTEGLNTNAGRKVLINQNREPDQNDSICSFCHNGGELILCDRCPSSFHLSCLGLKELPDGDWFCPSCCCKICSHYSCKHVNADSVDNSILVCDQCERKYHIVCRKSKGFTELNENENEHWLCSRECENIFNGLQKLVGKPIPVAGQDLTLTLLKTMKAQSSANIDCDPEALTQIESKLSVALELMHECFEPVIEAFTGTDLVEDVIFSKSSKLGRLNFKGFYTVILEKNDEVVTVASVRVFGPTVAEVPLVATKFQFRRLGMCTVLMRELEKKLIELGVERITLPAVHGMLKTWTSSFGFAKMSDYERSLFLDYPFLVFGDTITCQKPLGKPSIEERAVRPKPCTDLHQNHLMSTSVSCITETCH 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g02179 658 CDD NAT_SF 517 577 - -
Bach3g02179 658 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 461 614 IPR000182 GO:0016747
Bach3g02179 658 Pfam PHD-finger 320 362 IPR019787 -
Bach3g02179 658 Pfam Tify domain binding domain 238 289 IPR032308 -
Bach3g02179 658 Gene3D - 494 620 - -
Bach3g02179 658 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 309 362 IPR013083 -
Bach3g02179 658 PANTHER PHD FINGER PROTEIN 12 20 646 IPR042163 GO:0003714|GO:0045892
Bach3g02179 658 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 476 605 IPR016181 -
Bach3g02179 658 SMART PHD_3 320 361 IPR001965 -
Bach3g02179 658 SMART PHD_3 362 419 IPR001965 -
Bach3g02179 658 SUPERFAMILY FYVE/PHD zinc finger 311 361 IPR011011 -
Bach3g02179 658 ProSiteProfiles Zinc finger PHD-type profile. 318 363 IPR019787 -
Bach3g02179 658 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 363 422 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g02179 Bach-Chr3 28883796 28885772 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g02179 52 565 PHD Transcription Factor Family AT5G58610 36.301 5.39e-108 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Bach3g02179 TDBD 6.7e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g02179 - - qsa:O6P43_015988 598.971