Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g02165 ATGCCTCTATATCAGCCATCAAACGAGAGAACAAAAGGGGATGCAAAACTTGATGCAGGCGGTGGCGCCGAGATGCTTGATCTAGAAACCGCTGTTAAAGGCGGGGTTTTGGATGGCGGAGCGGCGGTAATTGGCGGCGGCTGCATCGCTGACAAATTGGATCTCAAGGTGTTGATTGAGGAGCTCGAGTCAATTGATGTGCCCTCAGTGTTTATTTGTCCAATCTCCCTGGAGCCAATGCAAGAGGCGGTGACCCTTTGCACGGGACAGACCTATGACAGATCCACTATTCTGAAATGGTTCTCTCTGGGTCACAGTACTTGTCCCACGACAATGCAGGAGCTTTGGGACGATTCAGTGACGCCCAACAAAACTTTGAATCAGTTAATTTATGGCTGGTTCTCTCAGAAGTACCTCGCAATGAAGAAGAAGTTCGAGGATGTGCAAGGAAGAGCTTTGGAGCTCTTGGAGACGCTCAAGAAGGTTAAGGGTCAAGCTAGAGTTCAAGCTCTTAAGGATCTTAGGCAAGTTGTTGCTGCCCATGCCTCCACAAGGAAGACAGTAGCAGAAAACGGTGGACTTTCCTTGATTTCTTCTTTATTGGGTCCTTTTACTTCGCACGCAGTTGGCTCTGAAGCAATAGGGATTCTTGTGAATTTGGATTTGAGTTCGGAATTGAGGGCCAACCTGATGCACCCCGCCAAGATATCATTGGTAGTGGATATTATGAATGAGGGAACAATTCAGACGAAGTTAAATTGTGCGAAATTGATTGGAATGTTGTTGAAGGAAGGAAATGATTCTTCTGAGACAGAAATTTTCTCAAGCTTGAGTCTTTTGGTTGGATTATTGAGGTTAGTAAGAGATAAGAGACACCCAGCTGGAGTGTTAACCGGGCTCATATTACTCAAGACTATATGTTCCAACGAATCAGTTAGAAGCTCAATTGTAAGAATAGGAGCAGTTCCTCAATTGATTGAGCTTTTGCCCAGTTTGAATAATGAGTGCTTAGAGTTAGCCTTGTATATTTTAGAGGTATTGTCAACTATTCCAGAGGGAAGATTGGCTTTGAAAGAATGTCCAAACATTATACCAAATGTGGTCAAGCTATTGATGAGAGTCTCAGAGAGCTGCACTCAATTCGCATTGACAATATTGTGGGCTATCTACAAGCTAGACCCAGAAGAATGTGCTTCACAGGCAGTGGAGGCCGGGTTGGCGCCTAAGCTGCTACTTGTAATTCAGAGTGGTTGCAACCCAGTGTTGAAGCAGAAGTCTGCTGAGCTTTTGAAATTGTGCAGTCTCAATTACTCTACTAGCATCTTGATTTCAAAGTGTATGCTCACCACAACGATGCAATGA 1362 0.4464 MPLYQPSNERTKGDAKLDAGGGAEMLDLETAVKGGVLDGGAAVIGGGCIADKLDLKVLIEELESIDVPSVFICPISLEPMQEAVTLCTGQTYDRSTILKWFSLGHSTCPTTMQELWDDSVTPNKTLNQLIYGWFSQKYLAMKKKFEDVQGRALELLETLKKVKGQARVQALKDLRQVVAAHASTRKTVAENGGLSLISSLLGPFTSHAVGSEAIGILVNLDLSSELRANLMHPAKISLVVDIMNEGTIQTKLNCAKLIGMLLKEGNDSSETEIFSSLSLLVGLLRLVRDKRHPAGVLTGLILLKTICSNESVRSSIVRIGAVPQLIELLPSLNNECLELALYILEVLSTIPEGRLALKECPNIIPNVVKLLMRVSESCTQFALTILWAIYKLDPEECASQAVEAGLAPKLLLVIQSGCNPVLKQKSAELLKLCSLNYSTSILISKCMLTTTMQ 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g02165 453 CDD RING-Ubox_PUB 68 120 IPR045210 -
Bach3g02165 453 SUPERFAMILY RING/U-box 61 137 - -
Bach3g02165 453 Pfam U-box domain 67 137 IPR003613 GO:0004842|GO:0016567
Bach3g02165 453 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 58 148 IPR013083 -
Bach3g02165 453 ProSiteProfiles U-box domain profile. 66 140 IPR003613 GO:0004842|GO:0016567
Bach3g02165 453 SMART Ubox_2 70 133 IPR003613 GO:0004842|GO:0016567
Bach3g02165 453 Gene3D - 149 294 IPR011989 -
Bach3g02165 453 Gene3D - 296 440 IPR011989 -
Bach3g02165 453 PANTHER WDSAM1 PROTEIN 61 440 IPR045185 GO:0061630
Bach3g02165 453 SUPERFAMILY ARM repeat 143 437 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g02165 Bach-Chr3 28811112 28812473 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g02165 1 453 U-box Gene Family AT5G65920 60.879 0.0 551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g02165 - - cave:132189805 658.292