Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g02155 ATGGATTCTGATCAAGCGAAGCTGTTTGTTGGTGGTATTTCTCGGGAGACAACCGAACTTATTCTGAGAGACCATTTCACCAAGTACGGCTCTGTTGTTGGTTCCACGATTTCGCTAGACCGGAGCACCAGAAATCCTAGAGGTTTTGGCTTCGTTAGGTTCTCTGATACTTCTGCAGCTGATAAAGCCCTTCAAGATACGCATGTTATATTGGGCAGAACGGTAGAAGTGAAAAAAGCAATACCGAGAAGCGAACAGCAATGCCAAAACCAACCACTGAGTAGAGGGACGAGTAACTGTTGTAGTAATGACAGTAGCAGTGACCAGATTAGGACTAAAAAGATTTTTGTAGGAGGCTTATCAGCTAGTATCTCTGAGGAAGAGTTTAAGAAATATTTTGAAAGGTTTGGTAGAATAACAGATGTAGTGGTGATGCAGGACAATATAACTCACCGTCCTAGGGGGTTTGGGTTCATCACTTTCGACACAGAAGAATCTGTTGAAAATGTTATGCTGAAAACTTTTCATGACTTGAATGGTAGACAGGTGGAGGTTAAGAGGGCTGTTCCCAAAGAGGGGAACAATGGCAATGATGGTGCTAACAAAATGAGATTTAAGTCTGGAAGAGGAACACCTAAAAGTTATCCTCACTATCCTAGGTACATGCTCCCTGGCTTTGCTCCTGTTCCCTGGTATAGTAATGATGGAGCATATTATTATGGATTAAACATCTATGATTGTTGGTACCCTATGGGAGGGTATGAGGGAAACGGCTATGCAGTTCCATCTGGTATTCCTAGGAACTTCTGGTATGGGCCCATGATGACCACTGCTCAGGCATGCCAGTTGCCTTATGTCCATGCTTCTTCTGGTCCTGCATATGTCGGTGGTAGGTTTGATCCAATTTTCGGTGTTAATGGATTTGTAAAAGGTGACATGATATCTCCGATTGAAGTGGTAAAGCAGGGTGTTGATTCTTCAAGTTTGAAGGGAAGTAATGGTGAAGCTTCTTGTTGA 1017 0.4297 MDSDQAKLFVGGISRETTELILRDHFTKYGSVVGSTISLDRSTRNPRGFGFVRFSDTSAADKALQDTHVILGRTVEVKKAIPRSEQQCQNQPLSRGTSNCCSNDSSSDQIRTKKIFVGGLSASISEEEFKKYFERFGRITDVVVMQDNITHRPRGFGFITFDTEESVENVMLKTFHDLNGRQVEVKRAVPKEGNNGNDGANKMRFKSGRGTPKSYPHYPRYMLPGFAPVPWYSNDGAYYYGLNIYDCWYPMGGYEGNGYAVPSGIPRNFWYGPMMTTAQACQLPYVHASSGPAYVGGRFDPIFGVNGFVKGDMISPIEVVKQGVDSSSLKGSNGEASC 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g02155 338 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 6 82 IPR000504 GO:0003723
Bach3g02155 338 SUPERFAMILY RNA-binding domain, RBD 107 210 IPR035979 GO:0003676
Bach3g02155 338 SMART rrm1_1 7 78 IPR000504 GO:0003723
Bach3g02155 338 SMART rrm1_1 114 186 IPR000504 GO:0003723
Bach3g02155 338 MobiDBLite consensus disorder prediction 86 107 - -
Bach3g02155 338 PANTHER RNA-BINDING PROTEIN MUSASHI HOMOLOG RBP6 1 272 - -
Bach3g02155 338 SUPERFAMILY RNA-binding domain, RBD 3 103 IPR035979 GO:0003676
Bach3g02155 338 Gene3D - 110 201 IPR012677 -
Bach3g02155 338 MobiDBLite consensus disorder prediction 190 210 - -
Bach3g02155 338 CDD RRM2_Hrp1p 114 191 - -
Bach3g02155 338 FunFam Heterogeneous nuclear ribonucleoprotein A2/B1 107 192 - -
Bach3g02155 338 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 113 190 IPR000504 GO:0003723
Bach3g02155 338 Gene3D - 4 88 IPR012677 -
Bach3g02155 338 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 8 75 IPR000504 GO:0003723
Bach3g02155 338 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 115 172 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g02155 Bach-Chr3 28755910 28757220 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g02155 8 205 Eukaryotic Initiation Factors Gene Family AT4G34110 25.871 1.93e-09 57.0