Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g02143 CGAGTTGTAAAGAGAGGAGAGAAAGGATAGATAACCCCTCATCGAGACTCAGAAATTAAGAAAGAAATTAAGCAAAAGCACAAGATCAAGATGGGAAGGGCTCCTTGCTGCGACAAAGCAAACGTGAAGAAAGGGCCATGGTCTCCAGAAGAAGATACGAAGCTCAAATCTTACATCGAGCAACATGGCACTGGTGGCAACTGGATTGCTTTGCCTCAAAAGATCGGCCTTAAAAGATGTGGAAAGAGTTGTCGTCTTAGGTGGCTGAACTATCTTCGCCCTAATATCAAGCATGGCGGTTTCTCTGAAGAAGAAGATAACATTATTTGCAATCTCTACATTAGTATTGGAAGCAGGTGGTCGGTTATCGCAGCCCAATTGCCAGGAAGAACTGATAATGATATAAAGAACTACTGGAACACAAGGCTGAAGAAGAAGCTTCTGGGTAAGCACCGCAAAGAGCAACAGGCACGTAGAGTGAGTAATACAAGTGTTAAGCAGGAAGCAAATAGGGGAAGCGCAATTTCCATGGTGATGGTTCCCGATGACAGTTCTCATCAACAGCCATATTGGCCAGAGATGCCTGTGCTGACCCCTTTGCCATGCTCAAACCAAGGCCCATGTTTCAACGACCATGATTCTATTAGAAAATTACTAATCAAGCTCGGAGGTAGATTTTCTGTTGATGACTATCAACCCACACCAATCCAAGAGGGGTTGAATCTTCAATTTTCAGATGCTACTGCTACTGCCAGCACACAACAGGTTTATGAAGAGAAAGCTGCGAATATGGGTTCTTCTGCTTCTGCTTGCATGAATAATGTTGCAATTAACAACAACCAAGTACAATTTGCGGAGACCCAGTACTGTGCAGGATTTGAGTCGGTGCAAGGACAAGCCAGTTTCAGCTCAACACTAGTTGAGGAAATGATATCTAGTTATCCACAAAGATTAGATGGGCTGGAGTTTTTCTATGGGGAGGACATGGTCAATGATAAGATAGGGTTAATAGGCCCTACTTGTGGGCAAAGTGCGAGCTGGGGTGGCACCACCTCTCTTGTTTACCCTCCTGTTGTTGCTTCCAATTACCAAGGGATGCGGCAAGAGATGCCACAATTTGAAGAGTTCAGGTATCCAGGGACGCAATAGCATCACCACCATGTATATGTACATTAATTCTCAGCATTAATTAGTCATTCATAGCAGCAACGGCGAATTATTAGTAAATGATCCCCAGAGAAAAACCCTCAATAAAGTCGATCAACTAGATATATGTAGCTATCTAGTCTTTTCTCTTTTCCATGATTGTTTTTGTTTCGTTGTTGGAAGTACAGTTTATCTTACTTGTTTGGTTATTTGCATTTGTG 1367 0.4287 MGRAPCCDKANVKKGPWSPEEDTKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDNIICNLYISIGSRWSVIAAQLPGRTDNDIKNYWNTRLKKKLLGKHRKEQQARRVSNTSVKQEANRGSAISMVMVPDDSSHQQPYWPEMPVLTPLPCSNQGPCFNDHDSIRKLLIKLGGRFSVDDYQPTPIQEGLNLQFSDATATASTQQVYEEKAANMGSSASACMNNVAINNNQVQFAETQYCAGFESVQGQASFSSTLVEEMISSYPQRLDGLEFFYGEDMVNDKIGLIGPTCGQSASWGGTTSLVYPPVVASNYQGMRQEMPQFEEFRYPGTQ 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g02143 352 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Bach3g02143 352 CDD SANT 71 113 IPR001005 -
Bach3g02143 352 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Bach3g02143 352 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Bach3g02143 352 Gene3D - 70 143 - -
Bach3g02143 352 CDD SANT 16 62 IPR001005 -
Bach3g02143 352 FunFam Transcription factor RAX3 70 144 - -
Bach3g02143 352 PANTHER OS09G0431300 PROTEIN 1 262 - -
Bach3g02143 352 FunFam Transcription factor RAX3 7 68 - -
Bach3g02143 352 Gene3D - 7 68 - -
Bach3g02143 352 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Bach3g02143 352 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Bach3g02143 352 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Bach3g02143 352 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Bach3g02143 352 SMART sant 13 64 IPR001005 -
Bach3g02143 352 SMART sant 67 115 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g02143 Bach-Chr3 28671264 28672944 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g02143 1 245 MYB Transcription Factor Family AT3G49690 53.600 4.98e-85 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach3g02143 Myb_DNA-binding 1.6e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g02143 K09422 - gmx:778079 447.973