Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g02142 TGATCGTTTAGCAGATTGCAACCGAGTTCTTCAACAATATCATTGAATTAACTGGGTTTCTTTTCAGGATATGGGTTTTGCTGATATCTGTGATCTGGGTCTTGGTATTGGCCCCCAAGAGATTTGCTTGAAGACCGATCACCGGGAATTTAGCGAGAAGAAGAAGCAAGATCAAGATATATTGAATTGCAATGATAAAAATGACGGATATCCATCTCTTGCGTTAGGACCACCAGCTGATGATGATGAAGCATATCAAGTAGCAGCAACAAAAGCTGAATCTGTTGATTTTCTTGCACAAGCCACATCTGATCCCAGTGCAGTTTCTTCATTTTCATACTCGTCTAGCATCAAGAGGGAGAGAGATCAGTTTGTGGGTGAAGAACTTGATCATGAGCTTGAGGTAGAGAAGTTTCCTTCAAGGATTACTGATTTAGATGAAGATGGAAATCCCAGGAAGAAACTTAGGCTTACCAAAGAACAATCCGCTCTTCTAGAGGACAGCTTCAAAGAGCATTCTACTCTCAATCCGAAGCAAAAGCAAGAACTGGCGAGGAAGCTTAAACTACGGGCTAGACAAGTAGAGGTGTGGTTTCAAAACAGGAGAGCCAGGACAAAGCTGAAGCAAACCGAAGTGGATTGTGAGTTACTGAAGAATTGCTGCGAAACGCTGACAGAAGAGAACAAGAGACTGCAAAAAGAACTACAAGAGCTGAAATCAATGAATACGGCATCGGGACCCATTTTTATGCAGCTTCCTGCTGCTACCCTTGCCATATGCCCTGCTTGTGAGAGAATTTGCAGTGGTGGCCCCGCCGGGAAAGGCAACGGCTCTTCTGCAACGGCGCCGTTCTTTATTGGCTCAAAGGTCCATAACTTCCACAAAAGTAATTATTCCTTCACGCACCCTTCTGCAGCTTGTTAG 925 0.44 MGFADICDLGLGIGPQEICLKTDHREFSEKKKQDQDILNCNDKNDGYPSLALGPPADDDEAYQVAATKAESVDFLAQATSDPSAVSSFSYSSSIKRERDQFVGEELDHELEVEKFPSRITDLDEDGNPRKKLRLTKEQSALLEDSFKEHSTLNPKQKQELARKLKLRARQVEVWFQNRRARTKLKQTEVDCELLKNCCETLTEENKRLQKELQELKSMNTASGPIFMQLPAATLAICPACERICSGGPAGKGNGSSATAPFFIGSKVHNFHKSNYSFTHPSAAC 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g02142 284 SMART HOX_1 127 189 IPR001356 GO:0003677
Bach3g02142 284 SUPERFAMILY Homeodomain-like 126 193 IPR009057 -
Bach3g02142 284 SMART halz 185 229 IPR003106 GO:0006355|GO:0043565
Bach3g02142 284 CDD homeodomain 128 186 IPR001356 GO:0003677
Bach3g02142 284 ProSitePatterns 'Homeobox' domain signature. 160 183 IPR017970 GO:0000981|GO:0006355
Bach3g02142 284 Gene3D - 123 190 - -
Bach3g02142 284 FunFam Homeobox-leucine zipper protein 18 118 190 - -
Bach3g02142 284 Coils Coil 184 221 - -
Bach3g02142 284 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 28 249 - -
Bach3g02142 284 Pfam Homeobox associated leucine zipper 185 218 IPR003106 GO:0006355|GO:0043565
Bach3g02142 284 Pfam Homeodomain 129 183 IPR001356 GO:0003677
Bach3g02142 284 ProSiteProfiles 'Homeobox' domain profile. 125 185 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g02142 Bach-Chr3 28654523 28655794 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g02142 1 284 Homeobox Transcription Factor Family AT2G22800 48.515 1.11e-64 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Bach3g02142 Homeodomain 2.1e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g02142 K09338 - gmx:100807072 304.293