Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g02139 ATGATCGGGATAGCAGAATCGAAACGATACGTCCCCAACCTCCAAACTTCTCATTGGGAACGGGGCCCATTGGAAACTTCGATTTCGGCTGGAGGAACACCCTCCCCATTTTCCATTAATTACAATGGAAATGCCGGTGCTTGCGACTGTTCTTCTCCTTCGTCTGCTATACACGGTTTTCTTTCCAATGATTTCGCCCCCGTTGAGTTTGAGTTGGACGAAGAATTTGACATGCCCATTGATGCTTTTTCTAGCGACAATTTCCGCATGTTCGAGTTTAAGGTTCGCAAATGTGCACGTGGCAGGTCACATGACTGGACGGAGTGCCCGTACGCCCATCCCGGCGAGAAGGCTCGCCGCAGGGATCCTCGGAAATTCCACTATTCCGGCACTGTGTGTCCCGAGTTTCGCAAAGGGGACTGCAATAAAGGTGACTCGTGCGAGTTTGCTCACGGAGTCTTCGAATCTTGGCTGCACCCAGCTCGTTACAGGACTCTGCTCTGCAAAGACGGAACAAATTGTCGCCGCCGAATTTGTTTCTTCGCTCACACTTCGGAACAATTGCGAGTCCTGACTCACGGGTCGGTTGAATCATCGAATGGATCACCGATTCGCCATGCTGTTGATTCACTCCGTCCGACTAATGCTTCGGCCTTTGTTTCATCACCAACTTCGGTGCTTAACTCGTCACCGCTGTCTGACTCGCCACCCTCATGGCCTACCGTCAGCCATCAATACGGCAACGTATCGTCTGAGGCGGTGAGTGAAATAGTTACGTCAATGCGTAATGTGCAACTTGATAACATCATCATGCCTGCTAGCGCTCGTAGTTCCCAACGCGGATCCGTGTTTGGTCAGACTATCCGACCCGGGTTTTTCAGCCTTCCTTCAACTCCAACTGGAACTAGGGCAAATACTAAATCATTACTTGACCTCTGGGATCAGAGCTACGATGAAGAGCCTGCAATGGAAAGGGTGGAATCGGGTAGAGACCTTAGAGCCAAGATATATGCCAAACTCAGTAAGGATAACTCGTTTGGGCGAAACGACACGGGGATTTCAGCCCCTGATCTTGGATGGATCTCCGAACTAATGAAGTGA 1101 0.5041 MIGIAESKRYVPNLQTSHWERGPLETSISAGGTPSPFSINYNGNAGACDCSSPSSAIHGFLSNDFAPVEFELDEEFDMPIDAFSSDNFRMFEFKVRKCARGRSHDWTECPYAHPGEKARRRDPRKFHYSGTVCPEFRKGDCNKGDSCEFAHGVFESWLHPARYRTLLCKDGTNCRRRICFFAHTSEQLRVLTHGSVESSNGSPIRHAVDSLRPTNASAFVSSPTSVLNSSPLSDSPPSWPTVSHQYGNVSSEAVSEIVTSMRNVQLDNIIMPASARSSQRGSVFGQTIRPGFFSLPSTPTGTRANTKSLLDLWDQSYDEEPAMERVESGRDLRAKIYAKLSKDNSFGRNDTGISAPDLGWISELMK 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g02139 366 ProSiteProfiles Zinc finger C3H1-type profile. 128 154 IPR000571 GO:0046872
Bach3g02139 366 SUPERFAMILY CCCH zinc finger 127 155 IPR036855 GO:0046872
Bach3g02139 366 PANTHER UNKEMPT FAMILY MEMBER 77 366 IPR045234 -
Bach3g02139 366 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 132 152 IPR000571 GO:0046872
Bach3g02139 366 SMART c3hfinal6 162 185 IPR000571 GO:0046872
Bach3g02139 366 SMART c3hfinal6 127 153 IPR000571 GO:0046872
Bach3g02139 366 FunFam Zinc finger CCCH domain-containing protein 66 85 153 - -
Bach3g02139 366 Gene3D - 127 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g02139 Bach-Chr3 28626287 28627387 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g02139 69 191 C2H2 Transcription Factor Family AT5G12850 63.710 9.46e-56 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Bach3g02139 zf-CCCH 8.9e-06 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g02139 - - qsa:O6P43_019066 422.935