Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g02138 ATGGGAAGAGCTCCTTGCTGTGACAAAGCAAATGTCAAGAGAGGGCAATGGTCTCCCGAAGAAGACGCAGTTCTCAAGAGTTACGTAGAGGCTCATGGCACTGGTGGAAATTGGATTGCATTGCCCAAAAAAGCTGGCCTTAGGCGTTGTGGCAAGAGTTGCCGTCTACGATGGCTCAATTATCTCAGGCCAGACATCAAACATGGAGGCTTCACTGAAGAGGAGGACAACATCATCTGCACCCTCTATGGTCAGATGGGAAGCAGATGGTCCTGCATAGCTTCTCAGCTATCTGGAAGAACAGACAATGATGTCAAGAATTACTGGAATACTAAATTGAAGAAGAAGCTAATGGCAGGAAAAGTGAGGCTCAAAACAACCGTCGACCCTGCCACCCCTGCTGCAATCCCATTACTAACCCAAATTACTGAAACTCAAAATTCAGAGTCTCCTGCTTCACAAAATCACAGTTGTTCACGCTCGTCGCTGCCAATCCTAACCAATGCTAATTCTGGCTTTAACATTAACCTTCAGAACATCAGTCTTGACCCAGTTCAATTATATGGCCAAGGGTTCGTATATGTATCAGAAACAGGAGGAAATTCAAACAACAGTTACATGTTGTCATTATCTCAGGAAGGCTCAAGCATTTCAGATTCGTCGCAAATTGCAATGGAAAGCAAGTGCTCAGCGCTTCCAGAACACGGCAGCGATGAAACTTCCGAAGTGTTGATGGATTTTGGCTTTGGATTCCACTATGACTTTGTCAATGGTCTTTACTACCAAGAGAAAGTCGGCGAAATAGCTCCAGGTTGCCATCCTAATCAGTTGGTTGATTTTACCACATTAAGCCTTGAGGACTGA 864 0.4491 MGRAPCCDKANVKRGQWSPEEDAVLKSYVEAHGTGGNWIALPKKAGLRRCGKSCRLRWLNYLRPDIKHGGFTEEEDNIICTLYGQMGSRWSCIASQLSGRTDNDVKNYWNTKLKKKLMAGKVRLKTTVDPATPAAIPLLTQITETQNSESPASQNHSCSRSSLPILTNANSGFNINLQNISLDPVQLYGQGFVYVSETGGNSNNSYMLSLSQEGSSISDSSQIAMESKCSALPEHGSDETSEVLMDFGFGFHYDFVNGLYYQEKVGEIAPGCHPNQLVDFTTLSLED 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g02138 287 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Bach3g02138 287 CDD SANT 71 113 IPR001005 -
Bach3g02138 287 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Bach3g02138 287 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Bach3g02138 287 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Bach3g02138 287 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Bach3g02138 287 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Bach3g02138 287 Gene3D - 7 68 - -
Bach3g02138 287 SMART sant 67 115 IPR001005 -
Bach3g02138 287 SMART sant 13 64 IPR001005 -
Bach3g02138 287 FunFam Transcription factor RAX3 7 68 - -
Bach3g02138 287 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Bach3g02138 287 PANTHER OS09G0431300 PROTEIN 1 228 - -
Bach3g02138 287 Gene3D - 70 132 - -
Bach3g02138 287 CDD SANT 17 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g02138 Bach-Chr3 28620471 28622104 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g02138 1 119 MYB Transcription Factor Family AT2G36890 81.513 2.30e-71 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach3g02138 Myb_DNA-binding 4.2e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g02138 K09422 - qsa:O6P43_015936 361.688