Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g02120 ATGGAGAATGATATCTTTAATGCTTCAGTGGACATGGCTGGCAGAGACTTTTCTGTCATTGATCAAATTCCACAACATCAGACACCAAACCCACTCGTTCACAGCTATTTGTTTGACCCTAATGACCAAACCCGTTCGATGCTTGCTAGTGAACGTACAAATAATGTCCATGCCGGTGTTCGTTTAATGAACCCTCTATGTATTGCTGATCCTGATTCTAATTCCTTAGTTACACCACAAGGAAAGAATATCGTGGGTAATACCTCACTTGGAACCTCAAGTCCCATAGGAAACTGTGATTTTCGAGAGCAATTAGCTGGAGTTACACCTACTAGTCCTGGTTCACTTGCTACCATTCTTGCTGCTAGAATTGGTTTTCAAGAAAATTTAGATAGATCAGCAACTTTGTCTCCTTCAGTCTGTTCATTGGAGGCTCTGGGAGCATGTATGTTAAATAACTGGCAGGATAGTTCAAACCCTTTGTTTGCAGCTTTTGGGGACCGTAGCTTCGATGAAGTACCTGTAATTAGTAAGTGGAATGCCAGCAAATTTCCTGAACCTCCCGAGCATGATGGAACTGGGTTGCAGCCTTATTCATCTATGGAAAACCTGGACCCTAATGGATGGACGTCATCATCAAATGGTGCAAATTTGACCAATCATCCTTACAATTTGTGCAATTTTAGTAATGTGCTCTCATTGAGTCTTGCTACTTCTCCAAACACAGGTCGCTCGGACGTGAGTTGTTCTGATGTGACCCATTACTTGAGTGGAACAAGGTCTGGTTTGGACCAAGCCTCTTCCAGCAGTAGAAAGTTTTCTATGAGTTTGGATTCTAACAAACATGTACAGTTTTCACAAGATATATTGGGTTCGAGATATCTTAATGGAATTCAAGAGATTCTCGCTCAAATTGCAAGATACTCACTAGAAAATCTAGAGCAGATAAATTGTTCAGCTGCAGGATTTGGAGCAGAAGGAAGTATATCAAACTCAGATTTCCCACCCAAAAAGAAAACTGCAGTGATGGATCACGACGCAAATTCTGTGCTTGATTCTCATACAGAACCTGCATTACAAAGACATGCAGCCGAATCCAAGAAAACCCAACTGCTGGCGCTTTTACAACTGGTTGATAGCCGATATAGTCAGTGTTTGGATGAGATACATACTGTTGTGTCTGCATTTCATGCTGCCACAGAGTTAGACCCGCACATACATGCACATTTTGCTCTTCAAACAATCTCTATCTTGTACAAGGACTTGCGAGAGAGGATAAGCAGTTATATTCTTGCCACGGGAGCAAATTTCAACAACTCATGCTCAGAAGAGAAAGAAATGTCTGCTGAAACTTCATTCATCCAACAGCAATGGGCTCTCCAGCAGTTGAAAAGAAAAGATCATCAGTTATGGAGGCCACAGAGGGGTTTGCCTGAAAGATCTGTCTCTGTTCTACGGGCTTGGATGTTTCAAAACTTCCTCCATCCGTATCCTAAAGATGCAGAGAAGCATCTACTTGCAGTGAAAAGTGGGTTGACGAGAAGTCAGGTATCCAACTGGTTTATAAATGCTCGTGTTCGGCTATGGAAGCCTATGATTGAGGAAATGTACGCTGAAATGAACAAAAGAAAGGCATATAGAAATGAAGAAGGAACAGGAAGCAGTCATAGAAGCCGGATAAGCATGAGCAATCATAGATTCAATATTAATTGA 1713 0.4168 MENDIFNASVDMAGRDFSVIDQIPQHQTPNPLVHSYLFDPNDQTRSMLASERTNNVHAGVRLMNPLCIADPDSNSLVTPQGKNIVGNTSLGTSSPIGNCDFREQLAGVTPTSPGSLATILAARIGFQENLDRSATLSPSVCSLEALGACMLNNWQDSSNPLFAAFGDRSFDEVPVISKWNASKFPEPPEHDGTGLQPYSSMENLDPNGWTSSSNGANLTNHPYNLCNFSNVLSLSLATSPNTGRSDVSCSDVTHYLSGTRSGLDQASSSSRKFSMSLDSNKHVQFSQDILGSRYLNGIQEILAQIARYSLENLEQINCSAAGFGAEGSISNSDFPPKKKTAVMDHDANSVLDSHTEPALQRHAAESKKTQLLALLQLVDSRYSQCLDEIHTVVSAFHAATELDPHIHAHFALQTISILYKDLRERISSYILATGANFNNSCSEEKEMSAETSFIQQQWALQQLKRKDHQLWRPQRGLPERSVSVLRAWMFQNFLHPYPKDAEKHLLAVKSGLTRSQVSNWFINARVRLWKPMIEEMYAEMNKRKAYRNEEGTGSSHRSRISMSNHRFNIN 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g02120 570 CDD homeodomain 471 532 IPR001356 GO:0003677
Bach3g02120 570 MobiDBLite consensus disorder prediction 548 570 - -
Bach3g02120 570 ProSiteProfiles 'Homeobox' domain profile. 468 531 IPR001356 GO:0003677
Bach3g02120 570 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 217 552 - -
Bach3g02120 570 SMART HOX_1 471 535 IPR001356 GO:0003677
Bach3g02120 570 Pfam Homeobox KN domain 488 527 IPR008422 GO:0003677|GO:0006355
Bach3g02120 570 SMART prehox3 283 428 IPR006563 -
Bach3g02120 570 SUPERFAMILY Homeodomain-like 473 540 IPR009057 -
Bach3g02120 570 Pfam Associated with HOX 289 427 IPR006563 -
Bach3g02120 570 Gene3D - 474 552 - -
Bach3g02120 570 MobiDBLite consensus disorder prediction 196 213 - -
Bach3g02120 570 MobiDBLite consensus disorder prediction 181 213 - -
Bach3g02120 570 MobiDBLite consensus disorder prediction 555 570 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g02120 Bach-Chr3 28515093 28517365 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g02120 230 544 Homeobox Transcription Factor Family AT4G32980 56.426 3.89e-108 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Bach3g02120 POX 1.7e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g02120 - - gmx:100820354 703.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach3g02120 3 28515093 28517365 Bach12g00363 12 2415709 2418159 BWGD
Bach3g02120 3 28515093 28517365 Bach3g02120 3 28515093 28517365 ECH