Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g02082 GCAAGTACCTCCAATTTACAAGCAATGGAGGGAGGTGCTCCGTACAACCCTCGTACAGTCGAGGAGGTCTTCAGGGATTTCAAGGGTCGAAGAGCTGGCATGATTAAGGCTCTCACCACCGATGTTGAAGAGTTCTATCAGCAGTGTGATCCAGAGAAGGAAAATCTTTGCCTTTATGGATTTCCTAGTGAGCAGTGGGAAGTCAACCTGCCTGCTGAGGAGGTGCCTCCAGAGCTTCCAGAGCCTGCATTGGGTATCAACTTTGCTAGAGATGGCATGCAAGAAAAGGACTGGCTATCATTGGTTGCTGTCCACAGTGATGCATGGTTACTTGCTGTGGCTTTCTATTTCGGTTCTAGGTTTGGATTTGATAAGGCTGATAGGAAACGGCTGTTTAATATGATAAATGATCTTCCAACAATATTTGAGGTTGTTACAGGGACAGCCAAGAAACAAGGACAAGGAAAGGAAAAGTCTTCAGTTTCTAATCATAGCAGTAACAAATTGAAGTCAAACAATAAGCAAGGACCTGAATCTCAGGGGAAGTATTCGAAAGTAATGCAACCAAAGGATGAGGATGAGGAGGGTTTGGAAGATGAAGATGAAGAGGAGCATGGAGAGACACTATGTGGGGCATGTGGAGAGAACTATGCAGCTGATGAGTTCTGGATTTGCTGTGACATATGTGAGAAGTGGTTTCATGGGAAGTGTGTGAAGATTACCCCTGCTAGGGCTGAGCATATCAAGCAGTATAAATGTCCATCCTGCAGCAACAAGAGAGCTCGACCTTGACACTAGGATGGTGACTACTTTATATCCTGGCGATTTGATGACTGCTAATTTGTGTATTAGGTCAGATCTATTGATCTTCGTGTCAATTTCAGGAAATCTGTTTCAAATGTTAGGTTCTTGAGGAGATCTTCCATCTTTAATTAGGATATCTACTTCAGGAGGGGACTTATTTTTCTTCTGCCTCAGGACTTGATTAAATGCTTCCTTAGGACCAGAGGTCTGTAGTGTATTTCGTGTCCATATGTTAATGAAGTTCTTT 1051 0.4339 MEGGAPYNPRTVEEVFRDFKGRRAGMIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEVNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGSRFGFDKADRKRLFNMINDLPTIFEVVTGTAKKQGQGKEKSSVSNHSSNKLKSNNKQGPESQGKYSKVMQPKDEDEEGLEDEDEEEHGETLCGACGENYAADEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSNKRARP 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g02082 255 MobiDBLite consensus disorder prediction 144 174 - -
Bach3g02082 255 FunFam PHD finger alfin-like protein 194 250 - -
Bach3g02082 255 MobiDBLite consensus disorder prediction 144 195 - -
Bach3g02082 255 Pfam PHD-finger 202 251 IPR019787 -
Bach3g02082 255 CDD PHD_AL_plant 201 251 IPR044104 -
Bach3g02082 255 ProSitePatterns Zinc finger PHD-type signature. 202 248 IPR019786 -
Bach3g02082 255 SUPERFAMILY FYVE/PHD zinc finger 191 252 IPR011011 -
Bach3g02082 255 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 192 250 IPR013083 -
Bach3g02082 255 ProSiteProfiles Zinc finger PHD-type profile. 199 251 IPR019787 -
Bach3g02082 255 PANTHER CPG BINDING PROTEIN 8 254 IPR045104 GO:0006355|GO:0042393
Bach3g02082 255 SMART PHD_3 201 249 IPR001965 -
Bach3g02082 255 Pfam Alfin 11 139 IPR021998 GO:0006355|GO:0042393
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g02082 Bach-Chr3 28265105 28268942 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g02082 1 254 Alfin-like Transcription Factor Family AT3G42790 77.647 5.11e-129 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Alfin-like Bach3g02082 Alfin 1.3e-69 No_clan