Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g02073 ATGGCTTTGTCGTCCGCCACCGCCACGGCGTACATCGCCGGTAGAAACATCGCAACAACTCGGCCGACAAAATTTGGATTCTCAACTTCGATCAATCTTAGTACAAAGCCGCGTAAACTTTACATCAGAAGCTCCGGTGATGCCTCGGCGGACACAACGACGACGGAGGCAGATTCAGAGAGTTCCATCGAAGTTCCACAAGAATCACCTTCTTTAATTTCTACTCTCAATGTCGAAAGGGCTCTCCGTGGCATACCAATTACAGATGCAGATCATTATGGCAGGCTTGGCCTTCGAAGAAATTGTTCATTTGAACAGGTGTTAGTAGCTTACAAGAACAAAATCGAAGAGCTGGAAAATCAAGGATTAGAGGCAGATGAACTCAACAAGAGATTAGAACTTATCAAAGAATCATTCAGAATCTTGTCATCTGAACAAGAGAGGAGGATGTATGACTGGAGCTTGGCTAGAACCGAGAATCCAGACACATACGCTTGGCCGTTCGAGGCTGACGTAACACAAGTCTCAAAAGGCACTCCTCCACCACAGGAACCGGAGGATGAGGGACCTACGAGGCTGGTTGGTTACTTTTTTCTAGGGTGGATCATATTATCAATCGTATTATCTATCGCACTGAATAGTAAACCTGAAATGGGAAGGAGTCCTGAGGGAAGCAGAAGAGGAGCTTGGACAGCTGAAGAAGATAAAATACTGGCAGATCACATCAAGACTCATGGGGAAGGAAAATGGACAAACGTTCCCAAACAAACAGGTCTGAGGAGATGTGGAAAGGCTTGCAGGCTTCGGTGGCTCAATTATCTGAGGCCTGATATCAAAAGAGGCAACATTACACCAGACGAAGTAGACCTCATCATCAGGCTCCACAAGCTCCTGGGCAACAGATGGTCACTGATAGCAGGAAGGCTACCGGGGAGAACAGACAACGAAATTAAAAACTACTGGAACGCCAACTTAGCTAAGAGGGCACAGAGGAAGGAATCAAGTGTTTGTCAAAATGGGAAAGTGGCAACTGCAGAAGCAGAATTTCTCCATGACCCAGAACTGAAACCGAGAACTCTAGATCGTGATTCTAATGTCGCCAACTTGGGATCTTCTTATATTGATGAGCAACCATCACTGGTGAACTCCACAGAAGAAAACGAATCAAAGTTCCTGTTGGATTTTGACTTTGAGTTTGGCCAAATTGCATTTTCAGAGTTTATGGACGCAGATTTTACCAAGTCCCAGATGTTCGAGATGAATGGTTTAACACAATCAGAAGAAGAAGGGCGCAACAGTGAATCTGCAGCATTTTCGACCGAAGCCATGGCCACACAAGTAAAATGGAATGCCTCTGACCCTAACAAGAGTAGTGAAACTGAAACACCAACATATTCAAGTGAAGCGCTTTGGAGTTGTAGCGATTCTTTTGGAATTAGCTTAGATTCCGAAAAAGGGTCTTGGGGTAGTCTCATTGATTTCGCTGAAGAATGTATCATCTGGGATTAA 1509 0.4486 MALSSATATAYIAGRNIATTRPTKFGFSTSINLSTKPRKLYIRSSGDASADTTTTEADSESSIEVPQESPSLISTLNVERALRGIPITDADHYGRLGLRRNCSFEQVLVAYKNKIEELENQGLEADELNKRLELIKESFRILSSEQERRMYDWSLARTENPDTYAWPFEADVTQVSKGTPPPQEPEDEGPTRLVGYFFLGWIILSIVLSIALNSKPEMGRSPEGSRRGAWTAEEDKILADHIKTHGEGKWTNVPKQTGLRRCGKACRLRWLNYLRPDIKRGNITPDEVDLIIRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNANLAKRAQRKESSVCQNGKVATAEAEFLHDPELKPRTLDRDSNVANLGSSYIDEQPSLVNSTEENESKFLLDFDFEFGQIAFSEFMDADFTKSQMFEMNGLTQSEEEGRNSESAAFSTEAMATQVKWNASDPNKSSETETPTYSSEALWSCSDSFGISLDSEKGSWGSLIDFAEECIIWD 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g02073 502 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 275 329 IPR017930 -
Bach3g02073 502 SUPERFAMILY Homeodomain-like 225 321 IPR009057 -
Bach3g02073 502 CDD SANT 229 274 IPR001005 -
Bach3g02073 502 FunFam MYB-related transcription factor 226 279 - -
Bach3g02073 502 CDD SANT 284 325 IPR001005 -
Bach3g02073 502 ProSiteProfiles Myb-like domain profile. 222 274 IPR001005 -
Bach3g02073 502 Coils Coil 108 145 - -
Bach3g02073 502 SUPERFAMILY Chaperone J-domain 90 156 IPR036869 -
Bach3g02073 502 Gene3D - 227 279 - -
Bach3g02073 502 MobiDBLite consensus disorder prediction 44 69 - -
Bach3g02073 502 Pfam Myb-like DNA-binding domain 227 274 IPR001005 -
Bach3g02073 502 Pfam Myb-like DNA-binding domain 280 322 IPR001005 -
Bach3g02073 502 SMART sant 226 276 IPR001005 -
Bach3g02073 502 SMART sant 279 327 IPR001005 -
Bach3g02073 502 MobiDBLite consensus disorder prediction 46 69 - -
Bach3g02073 502 Gene3D DnaJ domain 86 164 IPR036869 -
Bach3g02073 502 Gene3D - 284 347 - -
Bach3g02073 502 FunFam NAD(P)H-quinone oxidoreductase subunit U chloroplastic 73 164 - -
Bach3g02073 502 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 226 274 IPR017930 -
Bach3g02073 502 ProSiteProfiles Myb-like domain profile. 275 325 IPR001005 -
Bach3g02073 502 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT U, CHLOROPLASTIC 1 213 IPR044199 GO:0009535|GO:0010598
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g02073 Bach-Chr3 28215604 28219722 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g02073 224 332 MYB Transcription Factor Family AT3G13540 68.807 1.12e-50 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach3g02073 Myb_DNA-binding 6.2e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g02073 K23052 - qsu:112011870 268.855