Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g02072 ATGGCTTCAATGAGCAGTCAGAGCCGCAAGAAAGAACGTTGCAGAGGAGCCTGGACAGGCGAGGAGGACCAGAAACTGATCCAAGCCATTGAAATTTATGGCCCAAAAAAGTGGAAGATTGTTGCAGCCAAAGCAGGTAGTCTGAATCGATGTGGAAGAAGTTGCAGATTGAGATGGTTGAATTACCTTAGACCCAATATCAAGAGAGGCAACATATCAGATCAAGAGGAGGATTTGATATTAAGGCTTCATAGACTGTTAGGGAACAGGTGGTCGTTAATCGCTGGAAGACTACCCGGTCGAACTGATAATGAGATTAAGAATTACTGGAACTCTCATTTGAGCAAGAAGATAAAGCTCCAAACCCAGAACAGAGTCTTGAAAATAGAATCCATGCATACACAGCCACCGGAGATAGATGCAGCAGTTATGGTCCTTGAGGATAAAGAAAATGTTACCGTTAAGGTTGGGGAGGAAACAAACGCTAGGTTTATTGAAGGCGATGATTGGTTTCATTGTGCTAACGAGGGCCCACTAAATTTGGAATTGATGAGTAAATTTCTAGAAATAGATGAAAGTTGGTTTGAATTTGCATAA 597 0.4204 MASMSSQSRKKERCRGAWTGEEDQKLIQAIEIYGPKKWKIVAAKAGSLNRCGRSCRLRWLNYLRPNIKRGNISDQEEDLILRLHRLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKIKLQTQNRVLKIESMHTQPPEIDAAVMVLEDKENVTVKVGEETNARFIEGDDWFHCANEGPLNLELMSKFLEIDESWFEFA 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g02072 198 ProSiteProfiles Myb-like domain profile. 10 63 IPR001005 -
Bach3g02072 198 SMART sant 68 116 IPR001005 -
Bach3g02072 198 SMART sant 14 65 IPR001005 -
Bach3g02072 198 Gene3D - 72 138 - -
Bach3g02072 198 Pfam Myb-like DNA-binding domain 69 114 IPR001005 -
Bach3g02072 198 Pfam Myb-like DNA-binding domain 15 63 IPR001005 -
Bach3g02072 198 Gene3D - 14 68 - -
Bach3g02072 198 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 9 134 - -
Bach3g02072 198 CDD SANT 73 114 IPR001005 -
Bach3g02072 198 CDD SANT 17 63 IPR001005 -
Bach3g02072 198 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 63 IPR017930 -
Bach3g02072 198 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Bach3g02072 198 SUPERFAMILY Homeodomain-like 13 110 IPR009057 -
Bach3g02072 198 FunFam MYB-related transcription factor 14 68 - -
Bach3g02072 198 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g02072 Bach-Chr3 28210912 28211724 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g02072 4 164 MYB Transcription Factor Family AT5G40330 47.826 7.53e-52 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach3g02072 Myb_DNA-binding 4.5e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g02072 K09422 - qsu:111997867 261.151