Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g02052 ATGGATGGTGGTAGAATTGAAGTCATAAATAGTAAGGGTTACTCTAGGCTGTTTTCCCCGTCATTGTCTTCAATTAGACCATTGGAGCCAATGTCTCCTGTTTCGTCCTCCGTGAGTTCTGAACCGGTGGAAGTGCGATCAAGTGCTCCTTTTGCTGATCTTGTTATATGCGTTACTGGTCTATCTAAAGAAACAAGGAAACAGGTCATGGAAGCTACGGAGAGATTAGGTGGCCAGTATAGCCCCAATTTGCATCCTCAATGTACCCATTTGGTCGTTCAGATATCCTTTATTCTTTATGAAGTGATTTTTGGCGGACGTAAATTTGAGCATGCACTGAAACATGGAACAAGAAATGGTCTGTTTGTTGTCACACTGGGATGGTTTGTGGATAGCGTCAGGAAAAATGTGAGATTGAGTGAATCACTATACAGTGTGAAGAATTACGAGGAAAATAATATTCCCTTGGTTGATTTAAAACTGCTTGCTGGATGTAAAAATGTTGAAGATTCCTGTCTTCCCACAAGAATATGCGAAGCAAAGCAAGCTGATGTTGTTGAAGAATTGCAAAGATTTTCTAGGAAAGAGTCTAGCAGAAATATGGAATCAACCTTGTCTGGTTGTTCCATCTATGTTGATCCTGACATTTCAGCTGAATTGCGGAATAAGGTTATTGAGACTTCTTACAGAGAAGGTGCCAGTTTGGTGGAACGATGGTCTGTCGGGTGTAATGTTAGTCATGTAGTCACAGAAGGGACATCCATCCGAAGATATCTTGGACATTCTAGTAACCTCATTACACCTCTGTGGATTCTTAAAACAGCTAAAGAGAAACATGTGCAAAGGCTTGATCACATGTCTGCTGATTTGGCAAGGCAAGTTGGCTTGATGCTTGAGGACATTCGTGGGGTCGCAGGGGAGGAAGTAATGCTGCAAAAAGTCCCAGAAGAACTAAAGGGAATTGAAAGCAAAATTGGTTACACAGAAAGGCAGCAAATTGTGAATTTTGCGAAAGTTGGAGTCAGAAATCGCCGTGGTCGTAGAATGCAGACTTGCCAGACTCCAATCTGTCCTATAACACCCAACAACCTTTTGGATTCTATCTGCTGGTCAATCTCTGAACCAACTTCTACTGCTTCCATTTACACAGACCGTCTCAGTGTCAAAGATCATAATGAAAACCATCCTTCAATCATTTTTGAAGCCAAGGGTTCAAAAGCTTCATTTTCAAACTCCACTCGCTTTCTTACGGAAAGAGAGAAATCAGAGTTGATATTCAAAAGCCATTTTCTTACCATACTCTTTCCGATTGACCGATTTGCTGAGATGGGGCCTTCTTCCAGAACATTTTTCAGCCATAATGGCTTTACATGTCTTCAGTTGTTGGATCATGTTTATGCTTTTTACCAGGAAAATTTGTCGGCCCAGGAAATAGAAGCAGCAATTCATACCGATTCAAGACATGCTGACCGGCTTCGATCAGTGTACTCTAGTAAGGAAACTGCAGAGCGTGGGTATGTGATCTTCAAACGGGCTGATTTCTTGGGAAGTCGTATAAGTTTTGAAATGTTAAAGCGTGTAACTGGAGACAACAACTCTGGTGTCTTTGAGCTAATACTCAGAACGTAA 1629 0.415 MDGGRIEVINSKGYSRLFSPSLSSIRPLEPMSPVSSSVSSEPVEVRSSAPFADLVICVTGLSKETRKQVMEATERLGGQYSPNLHPQCTHLVVQISFILYEVIFGGRKFEHALKHGTRNGLFVVTLGWFVDSVRKNVRLSESLYSVKNYEENNIPLVDLKLLAGCKNVEDSCLPTRICEAKQADVVEELQRFSRKESSRNMESTLSGCSIYVDPDISAELRNKVIETSYREGASLVERWSVGCNVSHVVTEGTSIRRYLGHSSNLITPLWILKTAKEKHVQRLDHMSADLARQVGLMLEDIRGVAGEEVMLQKVPEELKGIESKIGYTERQQIVNFAKVGVRNRRGRRMQTCQTPICPITPNNLLDSICWSISEPTSTASIYTDRLSVKDHNENHPSIIFEAKGSKASFSNSTRFLTEREKSELIFKSHFLTILFPIDRFAEMGPSSRTFFSHNGFTCLQLLDHVYAFYQENLSAQEIEAAIHTDSRHADRLRSVYSSKETAERGYVIFKRADFLGSRISFEMLKRVTGDNNSGVFELILRT 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g02052 542 ProSiteProfiles BRCT domain profile. 200 288 IPR001357 -
Bach3g02052 542 Pfam Family of unknown function (DUF6699) 449 526 IPR046522 -
Bach3g02052 542 ProSiteProfiles BRCT domain profile. 46 146 IPR001357 -
Bach3g02052 542 CDD BRCT_TopBP1_rpt2_like 50 136 - -
Bach3g02052 542 SUPERFAMILY BRCT domain 48 148 IPR036420 -
Bach3g02052 542 PANTHER BRCT DOMAIN DNA REPAIR PROTEIN-RELATED 4 541 - -
Bach3g02052 542 Gene3D BRCT domain 49 148 IPR036420 -
Bach3g02052 542 Pfam twin BRCT domain 54 117 IPR001357 -
Bach3g02052 542 SMART BRCT_7 202 278 IPR001357 -
Bach3g02052 542 SMART BRCT_7 48 136 IPR001357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g02052 Bach-Chr3 28087185 28090833 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g02052 38 146 Core DNA Replication Machinery Family AT1G77320 33.945 1.31e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g02052 - - gmx:100815253 778.474