Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g02050 ATGATGAAACCGGCCATGGCTACTACCAGTGATAGTACTAAAGATCAATATCATCAAGTTAACAACTTTCCCGCTAATAACCCTAACCCTTCTCACGAGATCAAGTACAAAGGCGTGAGAAAACGCAAATGGGGCAAATGGGTATCTGAAATCAGGCTTCCCAATTGCCGGGACCGGATCTGGTTGGGCTCTTACGACACGCCGGAGAAAGCTGCAAGGGCTTTCGACGCAGCCCTTTACTGTCTACGAGGTCGCCATGCCAATTTCAATTTCCCCGATACCCCTTTTGAGATCAATATTGGCCCCGCTGACCAATCTCTCACTCCACAGGAGATTCAAGTTGTTGCTGCTAGGTTTGCTAATGAGCATGAGGCTGATAACATTAATGAAAGCGAAAGGCTAGAAGAAGAAGGGGAAGGAGATCAACCGAATGATAAAGAAGACTCCTCGGAGCATGTGAGTGGTGCTACATTTGAAGGCAACGATCATAGTATGGTGAAACAGACAGCATCCTTTTACGATGGAACTGATATGCAAGCGGACCATGGGGACATTATGGATTGGTCCTTTTTGCGCACGTTGGATAATTCAGATGTGGTTACCCCTGATTTAGGCCTCTATTCTGGGCTAGACAACATGCACTCAGGGGAGTTATTCTATCCTACATCACCACAACATTTTCAAGACAATGAGATCAATGGAGATATTGAAGGTCTTGATGATAATGTTGCTTGTTCTCACCAATCATTCCTCTGGAACTTCTGA 765 0.4536 MMKPAMATTSDSTKDQYHQVNNFPANNPNPSHEIKYKGVRKRKWGKWVSEIRLPNCRDRIWLGSYDTPEKAARAFDAALYCLRGRHANFNFPDTPFEINIGPADQSLTPQEIQVVAARFANEHEADNINESERLEEEGEGDQPNDKEDSSEHVSGATFEGNDHSMVKQTASFYDGTDMQADHGDIMDWSFLRTLDNSDVVTPDLGLYSGLDNMHSGELFYPTSPQHFQDNEINGDIEGLDDNVACSHQSFLWNF 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g02050 254 PRINTS Ethylene responsive element binding protein signature 58 74 IPR001471 GO:0003700|GO:0006355
Bach3g02050 254 PRINTS Ethylene responsive element binding protein signature 36 47 IPR001471 GO:0003700|GO:0006355
Bach3g02050 254 FunFam Ethylene-responsive transcription factor 2 35 93 - -
Bach3g02050 254 Pfam AP2 domain 35 84 IPR001471 GO:0003700|GO:0006355
Bach3g02050 254 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 19 168 - -
Bach3g02050 254 MobiDBLite consensus disorder prediction 124 161 - -
Bach3g02050 254 Gene3D AP2/ERF domain 34 93 IPR036955 GO:0003700|GO:0006355
Bach3g02050 254 MobiDBLite consensus disorder prediction 1 32 - -
Bach3g02050 254 SUPERFAMILY DNA-binding domain 35 93 IPR016177 GO:0003677
Bach3g02050 254 MobiDBLite consensus disorder prediction 1 29 - -
Bach3g02050 254 ProSiteProfiles AP2/ERF domain profile. 35 92 IPR001471 GO:0003700|GO:0006355
Bach3g02050 254 SMART rav1_2 35 98 IPR001471 GO:0003700|GO:0006355
Bach3g02050 254 CDD AP2 35 94 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g02050 Bach-Chr3 28073485 28074249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g02050 31 127 AP2-EREBP Transcription Factor Family AT1G19210 71.134 8.46e-43 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bach3g02050 AP2 8.4e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g02050 - - qsu:111984657 216.468