Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g02041 ATGATGGAGAACTACAGTGTCAAACTAGTTCAGGCTCTGATATTGTATTGGTCTCTCTGTTTGTTGGTTGGTATGGGCATGGCGCAAAGAAACGCAGCAGTGGCAGTGAAAGCGGGAGTGGTACTTGATCTTGATAAAGAGATGGGGAAGATGGGGTTGAGCTGCATCAACATGTCCCTTACAGACTTCTATTACTCTCATTCTAATTACAACACCAGGCTCGTTTTTAACGTCAGAGACTCCCGCAACGATGTTGTTACCGCCGCTGCTCAAGCTCTAGATCTCATAAAAGACGAACAAGTTAAAGCCATCATTGGGCCAGTAACTTCAATGGAGGCGGGGTTTATAATTGGTCTTGGAGACAAAGCTCATGTACCTATCCTAAGCTTCTCAGCAACAAGTCCTTCCCTCACTTCACTTGGGAGTCCATATTTTTTCCGAATTGCCCAGATTGATTCAGCTCAAGTTGATGCCATCAGTTCAATCGTCCAAGCTTTTGGGTGGAGAGAAGCAGTGCCCATTTACGTAGACAACGAATTTGGGAAAGGAGTCATACCCTTCTTAACCAATGCTCTCCAACAAGTCTATGCCCGAATTCCCTATCTCTCTGCCATTTCTCCTTCAGCCACAGATCAAGACATCAGAACGGAGCTCTACAAGTTGATGACTATGCAAACCAGAGTCTTTGTTGTGCACATGGCGCCTGATATTGCCTCTCGGCTCTTCACCATAGCAAAGCAGATTGGAATGATGAAGCAGGGTTATGTTTGGATTGTGAGCGATGGCATTTCTAATTTGTTGAACTTCTTGAATTATTCAGCCATAGAATCCATGGAAGGAGTCCTGGGTGTGAGAACCTATATTCCAAGAACGCAAGAGCTTGATAATTTTAAAATTCGATGGAAGAGGAAATTCCTACAGGACTATCCAATACTTGTCGATACAAACTTGGATGTTTTTGGAATATGGGCTTATGATGCTACCACTGCCTTAGCAATGGCTGTTGAGAAGGTTGGCAGCACCAACTTTGGGTTTCGCATGAGAAATGACTCTAGCAGCATAACTGATCTTGAAAGGTTTGGAATTTCTGACAAGGGTGAAAAGCTGCGTGAAGCTTTATCAAACACTAAATTTAGAGGCCTCAGTGGAGTGTTCAACGTTGTTGATGGGCAATTGCAAGCATCAACTTTTGAGATAATAAATGTGATGAGTAACGAGGAAAGGAGTGTTGGATTTTGGACCTCAAAGAATGGATTAGTTAGGAATCTGGGTTCAATAAACACAAGCACAAATTCTGCATCCAAGAACAATTTAGGACCCATCATCTGGCCAGGTGACACTTCCTCTGTTCCAAAAGGATGGGAGAATCCCACAAATGCAAACAAGTTGAGAATCGGAGTTCCAGTAAAAGACGGTTATACAGAATTTGTGAGCATAAAACATGACCATAGCACTAATCGAACACTTGTCACTGGATTCTGCATCGATGTTTTTGAGGCAGTGCTCAAAGTATTGCCTTACGCCCTGCCATACGAATTCATCCCCTTTGCAAAGCCTGACGGAGAGAGTGCTGGAACATACGATGAATTAGTTAGCCAAGTCTATTTCGAGAAGTTTGATGCTGTTGTGGGGGACATAACTATTATTGCAAAGAGGTCCAATTACGTGGAGTACACTCTACCGTACACAGAATCAGGAGTAACAATGGTTGTTCCAATAAAAGACAGTAGGAGGAAGAATGCGTGGACCTTCTTAAAGCCATTGACTTGGGATCTTTGGGTAACAACCGCTTGTTCGTTCCTATTCATTGGATTTGTTGTATGGATCCTCGAACACCGCATCAATGAAAACTTTAGAGGGCCACCTTCGTATCAGATCGGCACCAGCTTATGGTTTTCTTTCTCAACTATGGTGTTTTCCCATCGGGAGAAGGTAGTGAGCAACTTGGCTAGATTTGTGATCACAGTATGGGTTTTTGTGGTTCTCATTCTGATTCAAAGCTATACTGCGAGCCTGACGTCCCTCTTAACAGTTGAGCAGCTTCGTCCAACTCTTACAGATGTGAATCAACTTATAGAGAATAGGTTAAGTGTTGGTTATCTAAAAGGTTCTTTCGTGTACGGAATGCTGAAGGACATGGGATTTCAAGATTACCAGCTCAAAGTTTACAATTCTACAGGGCACTGCAATGAGCTTTTCATGAAAGGAAGTGCGAATGAAGGCATTGCTGCTGCTTTCGACGAAGTCCCTTACGTAAAACTCTTTCTTGCAAAATACTGCTCCAAGTATGCCATGGTTGAACCTACATTTAGAACCGGGGGCTTGGGCTTTGTATTCCCGAAAGGTTCCCCTCTCGGGGCTGACATTTCAAGGGCGATATTGAATGTGACTCAGGGTGATGAAATGAAAAGAATTGAGAGGGCATGGTTCCAGAGGAGCAGTTGCCAAGAGTCTGATACAGCAATTTCTTCTAATACTAGTAGCCTAGGCCTTGAGAGTTTCTGGGGCTTATTTCTAATTGCAGGGGTTGCTTCTGTATCAGCTCTCATAGTTTTTGCAGTTATGTTCCTCTACAAGCATAGACATATCTTAAGCTGTAATGACAATACCTCAATATGGAGAAGAATTGAACATGACCATAGCACTAATCAAACACATGTCACTAGATTCTGCATCGCCGTTTTTGAGGCAGTGCTCAAAGTATTGCCTTATGCCCTGCCATACGAATTCATCCCCTTTGCAAAGCCTGACGTAGAGAGTGCTGGAACATACAATGAATTGGTTAGCCAAGTCTATTTTTGGAAGTTTGATGCTGTTGTGGGTCACCGCAAACAGGTCCAATTATGTGGACTACACTCTACGCTTGCTAGTTCCTATTCATTGGATTTGTTGTATGGATCCTCGAACACCGCATCAATGAAAACTTTAGAGGGCCTCCTTCGTATCAGATTGGCACCAGCTTATGGTTTTCTTTCTCAACTATGGTGTTTTCCCATCGTAGTGAGCAACTTGGGTAGATTTGTGGTCACAGTTTGGGTTTTTGTGGTTCTAATTCTGATTCAAAGCTACACAGCAAGCCTGATTTCTCTCTTAACAGTTGATCAGCTTCGTCCTGCTCTTACTTATGTGAATCAACTTATAAAGAATAGGCTAAGCGTTGGTTATCAGGAAGGTTCTTTTGTGTATGGAATGCTGAAGGACATGGGTTTTCAAGATTACCAGCTCAAAGTTTACAATTCTACAGAGCACTGCAATGAGCTTTTCATGAAAGGAAGTGCAAATGGAAGCATTGCTGCTGCTTTCGATGAAATCCCTTACGTGAAACTCTTCCTTGCAAAATACTGCTCCAAGTATGCCATGGTTGAACCTACATTTAGAACAGCGGGCTTTGGCTTTGCATTCCCAAAAGGTTCCCCTCTTGTGGCCGACATTTCAAGGGCGATATTGAATGTGACTCAGGGAGATGAAATGAAGAGAAGTGAGAGGGCATGGTTCCAGAAGAGCAGCTGCCCAGATTATGACACAGCACTTTCTTCTAATACTAGCAGTTTAGGCCTTGAGAGCTTCTGGTACCTATTTCTAATTGCAGGGATTGCTTCTGTATCAGCTCTTATAGTTTTTGCTGTTACATTCCTCTACAGGCATAGACATATATTGTTAAGCTATAATCCCAATACCTCAATATGGAGACGAATTGGCATATTGGTTTCCCAATATACAAGACCCTTGAACCAGGTTCCATTCGTTGGGCATCTATTCACTCCTCCTGTTAACGTTACTGCAGTGGCAAAAGTTGCTGTTAAAGCTGCTACCGACCCAGTTTTCTCGCCGGGAATCATAGATGTCTACGGAATACAACGTTATAGTCAGCATAAATCAAAGTAG 3885 0.4291 MMENYSVKLVQALILYWSLCLLVGMGMAQRNAAVAVKAGVVLDLDKEMGKMGLSCINMSLTDFYYSHSNYNTRLVFNVRDSRNDVVTAAAQALDLIKDEQVKAIIGPVTSMEAGFIIGLGDKAHVPILSFSATSPSLTSLGSPYFFRIAQIDSAQVDAISSIVQAFGWREAVPIYVDNEFGKGVIPFLTNALQQVYARIPYLSAISPSATDQDIRTELYKLMTMQTRVFVVHMAPDIASRLFTIAKQIGMMKQGYVWIVSDGISNLLNFLNYSAIESMEGVLGVRTYIPRTQELDNFKIRWKRKFLQDYPILVDTNLDVFGIWAYDATTALAMAVEKVGSTNFGFRMRNDSSSITDLERFGISDKGEKLREALSNTKFRGLSGVFNVVDGQLQASTFEIINVMSNEERSVGFWTSKNGLVRNLGSINTSTNSASKNNLGPIIWPGDTSSVPKGWENPTNANKLRIGVPVKDGYTEFVSIKHDHSTNRTLVTGFCIDVFEAVLKVLPYALPYEFIPFAKPDGESAGTYDELVSQVYFEKFDAVVGDITIIAKRSNYVEYTLPYTESGVTMVVPIKDSRRKNAWTFLKPLTWDLWVTTACSFLFIGFVVWILEHRINENFRGPPSYQIGTSLWFSFSTMVFSHREKVVSNLARFVITVWVFVVLILIQSYTASLTSLLTVEQLRPTLTDVNQLIENRLSVGYLKGSFVYGMLKDMGFQDYQLKVYNSTGHCNELFMKGSANEGIAAAFDEVPYVKLFLAKYCSKYAMVEPTFRTGGLGFVFPKGSPLGADISRAILNVTQGDEMKRIERAWFQRSSCQESDTAISSNTSSLGLESFWGLFLIAGVASVSALIVFAVMFLYKHRHILSCNDNTSIWRRIEHDHSTNQTHVTRFCIAVFEAVLKVLPYALPYEFIPFAKPDVESAGTYNELVSQVYFWKFDAVVGHRKQVQLCGLHSTLASSYSLDLLYGSSNTASMKTLEGLLRIRLAPAYGFLSQLWCFPIVVSNLGRFVVTVWVFVVLILIQSYTASLISLLTVDQLRPALTYVNQLIKNRLSVGYQEGSFVYGMLKDMGFQDYQLKVYNSTEHCNELFMKGSANGSIAAAFDEIPYVKLFLAKYCSKYAMVEPTFRTAGFGFAFPKGSPLVADISRAILNVTQGDEMKRSERAWFQKSSCPDYDTALSSNTSSLGLESFWYLFLIAGIASVSALIVFAVTFLYRHRHILLSYNPNTSIWRRIGILVSQYTRPLNQVPFVGHLFTPPVNVTAVAKVAVKAATDPVFSPGIIDVYGIQRYSQHKSK 1294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g02041 1294 SUPERFAMILY Periplasmic binding protein-like II 890 1167 - -
Bach3g02041 1294 FunFam Glutamate receptor 2.7 1073 1172 - -
Bach3g02041 1294 FunFam Glutamate receptor 581 711 - -
Bach3g02041 1294 Pfam Ligand-gated ion channel 812 844 IPR001320 GO:0015276|GO:0016020
Bach3g02041 1294 SUPERFAMILY Periplasmic binding protein-like I 55 445 IPR028082 -
Bach3g02041 1294 SUPERFAMILY Periplasmic binding protein-like II 441 812 - -
Bach3g02041 1294 FunFam Glutamate receptor 326 461 - -
Bach3g02041 1294 CDD GluR_Plant 461 810 - -
Bach3g02041 1294 CDD PBP1_GABAb_receptor_plant 42 423 IPR044440 -
Bach3g02041 1294 Gene3D - 153 316 - -
Bach3g02041 1294 Gene3D - 463 580 - -
Bach3g02041 1294 Pfam Bacterial extracellular solute-binding proteins, family 3 1020 1166 IPR001638 -
Bach3g02041 1294 SMART GluR_14 861 1167 IPR001320 GO:0015276|GO:0016020
Bach3g02041 1294 SMART GluR_14 462 812 IPR001320 GO:0015276|GO:0016020
Bach3g02041 1294 FunFam Glutamate receptor 157 315 - -
Bach3g02041 1294 Gene3D - 581 711 - -
Bach3g02041 1294 Gene3D - 1074 1172 - -
Bach3g02041 1294 Gene3D - 757 817 - -
Bach3g02041 1294 Pfam Receptor family ligand binding region 56 402 IPR001828 -
Bach3g02041 1294 Pfam Ligand-gated ion channel 999 1199 IPR001320 GO:0015276|GO:0016020
Bach3g02041 1294 Gene3D - 835 1061 - -
Bach3g02041 1294 CDD GluR_Plant 879 1165 - -
Bach3g02041 1294 Pfam Bacterial extracellular solute-binding proteins, family 3 490 811 IPR001638 -
Bach3g02041 1294 Gene3D - 362 462 - -
Bach3g02041 1294 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 36 876 IPR015683 -
Bach3g02041 1294 FunFam Glutamate receptor 462 581 - -
Bach3g02041 1294 FunFam Glutamate receptor 2.7 718 817 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g02041 Bach-Chr3 28000898 28007691 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g02041 19 864 Ion Channels AT2G29120 53.882 0.0 904
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g02041 K05387 - qsa:O6P43_019170 1226.46