Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g02039 ATGAGTAACGGGGAAAGGAGTGTTGGATTTTGGACGTCAAAGAATGGATTAGTTAGGAATCTGGGTTCAATAAACACAAGCAAATATTCTGCATCCAAGAACAATTTAGGACCCGTCATCTGGCCAGGTGACACTTCCTCTGTTCCAAAAGGTTGGGAAAATCCCATAACTGCAAACAAGTTGAGAATCGGAGTTCCAGTAAAAGACGGTTATACTGAATTTGTGAATATAGAACATGACCATAGCACTAATCAAACACATGTCACTGGATTCTGCATCGCTGTTTTTGAGGCAGTGCTCAAAGTATTGCCTTATGCCCTGCCATACGAATTCATCCCTTTTGCAAAGCCTGAAGGAGAGAGTGCTGGAACATACAATGAATTGGTTAGCCAAGTCTATTTTGCCAAGTTTGATGCTGTTGTGGGGGACACAACGATCACTGCAAACAGGTCCAATTATGTGGACTACACTCTACCGTACACAGAATCAGGTGTAACAATGGTTGTTCCAGTAAAAGACAGTAGGAGGAAGAATGCGTGGATCTTCTTAAAGCCATTGACTTGGGATCTTTGGGGGGAGAAGGTAATGAGCAACTTGGGGAGATTTGTGGTCACAGTTTGGATTTTTGTGGTTCTAATTCTGATTCAAAGCTACACAGCAAGCCTGACTTCTCGCTTAACAGTTGATCAGCTTCGTCCTGCTGTTATTGATGTGAAACAACTTGAGTAG 729 0.4252 MSNGERSVGFWTSKNGLVRNLGSINTSKYSASKNNLGPVIWPGDTSSVPKGWENPITANKLRIGVPVKDGYTEFVNIEHDHSTNQTHVTGFCIAVFEAVLKVLPYALPYEFIPFAKPEGESAGTYNELVSQVYFAKFDAVVGDTTITANRSNYVDYTLPYTESGVTMVVPVKDSRRKNAWIFLKPLTWDLWGEKVMSNLGRFVVTVWIFVVLILIQSYTASLTSRLTVDQLRPAVIDVKQLE 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g02039 242 Pfam Ligand-gated ion channel 180 241 IPR001320 GO:0015276|GO:0016020
Bach3g02039 242 FunFam Glutamate receptor 60 179 - -
Bach3g02039 242 Gene3D - 60 195 - -
Bach3g02039 242 SUPERFAMILY Periplasmic binding protein-like II 38 192 - -
Bach3g02039 242 Gene3D - 1 59 - -
Bach3g02039 242 SMART GluR_14 60 238 IPR001320 GO:0015276|GO:0016020
Bach3g02039 242 Pfam Ligated ion channel L-glutamate- and glycine-binding site 74 170 IPR019594 GO:0004970|GO:0016020
Bach3g02039 242 Gene3D - 196 242 - -
Bach3g02039 242 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 196 241 IPR015683 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g02039 Bach-Chr3 27981315 27982259 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g02039 3 242 Ion Channels AT5G11180 46.207 2.60e-80 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g02039 K05387 - qsu:112000819 341.658