Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g02038 ATGGCACAAAGAAACGCAGCAGTGGCAGTGAAAGTGGGAGTAGTACTTGATCTTGATAAAGAGATAGGGAAGATGGGGTTGAGCTGCATCAACATGTCCCTTACAGACTTCTATTACTCTCATTCTAATCACAGCACCAGGATCGTTTTCAACGTCAGAGACTCCCGCAACGATGTTGTTGCTGCCGCTGCTCAAGCTCTAGATCTCATAAAAGACGAACAAGTTAAAGCCATCATTGGGCCAATAACTTCAATGGAGGCTGGGTTTATAATTGGTCTTGGAGACAAAGCTCATGTGCCTATCCTAAGCTTCTCAGCAACAAGTCCTTCCCTCACTTCACTTGGGAGTCCATATTTTTTCCGAATTGCCCAGATTGATTCAGCTCAAGTTGATGCCATCAGTTCAATCGTCCAAGCTTTTGGGTGGAGAGAAGCAGTGCCCATTTACGTAGACAACGAATTTGGGAAAGGAGTCATACCCTTCTTAACCAATGCTCTCCAACAAGTCTATGCCCGAATTCCCTATCTCTCTGCCATTTCTCCTTCCGCCACAGATCAAGACATCAGAACGGAGCTCTACAAGTTGATGACTATGCAAACCAGAGTCTTTGTTGTGCACATGGCGCCCAATATTGGCTCTCGGCTCTTCACCATAGCAAAGCAGATTGGAATGATGAAGCAGGGTTATGTTTGGATTGTAAGCGATGGCATTGCTAATTTGTTGAACTTCTTGAATTATTCAGTCATAGAATCCATGGAAGGAGTCTTGGGTGTGAGAACCTATATTCCAAGAACAAAAGAGCTTGATAATTTTAAAATTCGATGGAAGAGGAAATTCCTACAAGACTATCCAAACCTTGTCGATACAAACTTGAATGCTTTTGGAATATGGGCTTATGATGCTACCACTGCCTTAGCAATGGCTGTTGAGAAGGTTGGCAGCACCAACTTTGGGTTTCGCATGAGAAATGACTCTAGCAGCATAACTGATCTTGAAAGGCTTGGAATTTCTGACAAGGGTGAAAAGCTGCGTGAAGCTTTATCAAACACTAAATTTAGAGGCCTCGGTGGAGTGTTCAACGTTGTTGATGGGCAACTGCAAGCATCAATTTACGAGATAATAAATGTGATGAGTAACGGGGAAAGGAGTGTTGGATTTTGGACGTCAAAGAATGGATTAGCTAGGAATCTGGGTTCAATAAACACAAGCACATATTCTGCATCCAAGAACAATTTAGGACCCGTCATCTGGCCAGGTGACACTTCCTCTGTTCCAAGAGGTTGGGAGAATCCCACAAATGCAAACAAGTTGAGAATCGGAGTTCCAGTTAAAGACGGTTATACAGAATTTGTGAGCATAAAACATGACCACAGCACTAATCGAACACATGTCACGGGATTCTCCATCGCTGTTTTTGAGGCAGTGCTCAAAGTATTGCCTTACGCCCTGCCATACGAATTCATCCCCTTTGCAAAGCCTGACGGAGAGAGTGCTGGAACATACGATGAATTAGTTAGCCAAGTCTATTTCGAGAAGTTTGATGCTGTTGTGGGGGACATAAGTATTATTGCAAACAGGTCCAATTACGTGGAGTACACTCTACCATACACAGAATCAGGAGTAACAATGGTTGTTCCAATAAAAGACAGTAGGAGGAAGAATGCGTGGACCTTCTTAAAGCCATTGACTTGGGATCTTTGGGTAACAACCGCTTGTTTGTTCCTATTCATTGGATTTGTTGTATGGATCCTCGAACACCGCATCAATGAAAACTTTAGAGGGCCTCCTTCGTATCAGATAGGCACTAGCTTATGGTTTTCTTTCTCAACTATGGTTTTTTCCCATCGGGAGAAGGTAGTGAGCAACTTGTGTAGATTTGTGGTCACAATATGGGTTTTTGTGGTTCTCATTCTGAGTCAAAGCTATACTGCGAGCCTGACGTCCCTCTTAACAGTTGAGCAGCTTCGTCCAACTCTTACAGATGTGAATCAACTTAGAGAGAATAGGTTAAGTGTTGGTTATCTAAAAGGTTCTTTCGTGTACGGAATGCTGAAGGACATGGGATTTCAAGATTACCAGCTCAAAGTTTACAATTCTACAGAGCACTGCAATGAGCTTTTCAGGAAAGGAAGTGCGAATGGAGGCATTGCTGCTGCTTTCGACGAAGTCCCTTTCGTAAAACTCTTTCTTGCAAAATACTGCTCCAAGTATGCCATGGTTGAACCTACATTTAGAACCGGGGGCTTAGGCTTTGTATTCCCGAAAGGTTCCCCTCTCGGGGCTGACATTTCAAGGGCGATATTGAATGTGACTCAGGGTGATGAAATGAAAAGAATTGAGAGGGCATGGTTCCAGAGGAGCAGTTGCCCAGAGTCTGATACAGCAATTTCTTCTAATACTAGTAGTCTAGGCCTTGACAGTTTCTGGGGCTTATTTCTAGTTGCAGGGGTTGCTTCTGTATCAGCTCTCATAGTCTTTGCAGTTATATTCCTCTACAAGCATAGACATATCTTAAGCTGTAATGCCAATACCTCAATATGGAGAAGAATTGGTATATTGCTAAGGATCTTTGACCAAAGAGATATGAGCTCTCACACTTTCAGAAAAAGTGAAACTAGCAGTAGACATATTTTGAGTTCGGTTGAGCACTCTCCAACTACGCACTCTCCACCAAGTTCATCCAACGACAAAGGAATGTTCTCTCCACACTTGGCTGATATTAACCCATATACTCATGCTTATGCTCATGCGCCTCAAGGGACCACTCCAATCAATTCTCAACATTAA 2787 0.4309 MAQRNAAVAVKVGVVLDLDKEIGKMGLSCINMSLTDFYYSHSNHSTRIVFNVRDSRNDVVAAAAQALDLIKDEQVKAIIGPITSMEAGFIIGLGDKAHVPILSFSATSPSLTSLGSPYFFRIAQIDSAQVDAISSIVQAFGWREAVPIYVDNEFGKGVIPFLTNALQQVYARIPYLSAISPSATDQDIRTELYKLMTMQTRVFVVHMAPNIGSRLFTIAKQIGMMKQGYVWIVSDGIANLLNFLNYSVIESMEGVLGVRTYIPRTKELDNFKIRWKRKFLQDYPNLVDTNLNAFGIWAYDATTALAMAVEKVGSTNFGFRMRNDSSSITDLERLGISDKGEKLREALSNTKFRGLGGVFNVVDGQLQASIYEIINVMSNGERSVGFWTSKNGLARNLGSINTSTYSASKNNLGPVIWPGDTSSVPRGWENPTNANKLRIGVPVKDGYTEFVSIKHDHSTNRTHVTGFSIAVFEAVLKVLPYALPYEFIPFAKPDGESAGTYDELVSQVYFEKFDAVVGDISIIANRSNYVEYTLPYTESGVTMVVPIKDSRRKNAWTFLKPLTWDLWVTTACLFLFIGFVVWILEHRINENFRGPPSYQIGTSLWFSFSTMVFSHREKVVSNLCRFVVTIWVFVVLILSQSYTASLTSLLTVEQLRPTLTDVNQLRENRLSVGYLKGSFVYGMLKDMGFQDYQLKVYNSTEHCNELFRKGSANGGIAAAFDEVPFVKLFLAKYCSKYAMVEPTFRTGGLGFVFPKGSPLGADISRAILNVTQGDEMKRIERAWFQRSSCPESDTAISSNTSSLGLDSFWGLFLVAGVASVSALIVFAVIFLYKHRHILSCNANTSIWRRIGILLRIFDQRDMSSHTFRKSETSSRHILSSVEHSPTTHSPPSSSNDKGMFSPHLADINPYTHAYAHAPQGTTPINSQH 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g02038 928 Gene3D - 437 554 - -
Bach3g02038 928 Pfam Bacterial extracellular solute-binding proteins, family 3 463 785 IPR001638 -
Bach3g02038 928 Pfam Ligand-gated ion channel 786 818 IPR001320 GO:0015276|GO:0016020
Bach3g02038 928 FunFam Glutamate receptor 2.7 692 791 - -
Bach3g02038 928 FunFam Glutamate receptor 336 435 - -
Bach3g02038 928 Gene3D - 555 687 - -
Bach3g02038 928 SUPERFAMILY Periplasmic binding protein-like II 414 786 - -
Bach3g02038 928 CDD GluR_Plant 435 784 - -
Bach3g02038 928 PIRSF IGluLR_plant 1 909 IPR017103 -
Bach3g02038 928 MobiDBLite consensus disorder prediction 877 898 - -
Bach3g02038 928 SUPERFAMILY Periplasmic binding protein-like I 10 419 IPR028082 -
Bach3g02038 928 CDD PBP1_GABAb_receptor_plant 16 397 IPR044440 -
Bach3g02038 928 FunFam Glutamate receptor 131 289 - -
Bach3g02038 928 FunFam Glutamate receptor 436 555 - -
Bach3g02038 928 Pfam Receptor family ligand binding region 31 376 IPR001828 -
Bach3g02038 928 Gene3D - 730 791 - -
Bach3g02038 928 Gene3D - 336 436 - -
Bach3g02038 928 FunFam Glutamate receptor 555 685 - -
Bach3g02038 928 Gene3D - 127 292 - -
Bach3g02038 928 SMART GluR_14 436 786 IPR001320 GO:0015276|GO:0016020
Bach3g02038 928 MobiDBLite consensus disorder prediction 867 898 - -
Bach3g02038 928 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 10 869 IPR015683 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g02038 Bach-Chr3 27977722 27981088 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g02038 4 870 Ion Channels AT2G29120 52.644 0.0 914
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g02038 K05387 - qsa:O6P43_019170 1279.62