Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g02036 ATGATGGAGAAAACTAGGGCCAAACTTGTTCAGCCTCTGATATTGTCTTGGTCTCTCTGTTTGTTGGTTGGTATGGGCATGGCGCAAAGAAACGCAGCAGTGGCAGTGAAAGTGGGAGTGGTACTTGATCTTGATAAAGAGATAGGGAAGATGGGGTTGAGCTGCATCAACATGTCCCTTACAGACTTCTATTACTCTCATTCTAATTACAACACCAGGCTCGTTTTTAACGTCAGAGACTCCCGCAACGATGTTGTTACTGCCGCTGCTCAAGCTCAAGTTGATGCCATCAGTTCAATCGTCCAAGCTTTTGGGTGGAGAGAAGCAGTGCCCATTTACGTAGACAACGAATTTGGGAAAGGAGTCATACCCTTCTTAACCAATGCTCTCCAACAAGTCTATGCCCGAATTCCCTATCTCTCTGCCATTTCTCCTTCAGCCACAGATCAAGACATCAGAACGGAGCTCTACAAGTTGATGACTATGCAAACCAGAGTCTTTGTTGTGCACATGGCGCCCAATACTGGCTCTCGGCTCTTCACCATAGCAAAGCAAATTGGAATGATGAAGCAGGGTTATGTTTGGATTGTGAGCGATGGCATTGCTAATTTGTTGAACTTCTTGAATTATTCAGTCATAGAATCCATGGAAGGAGTCTTGGGTTTGAGAACCTATATTCCAAGAACACAAGAGCTTGATAATTTTAAAATTCGATGGAAGAGGAAATTAATACAAGACTATCCAAACCTTGTCGATATAAACTTGAATGCTTTTGGAATATGGGCTTATGATGCTACCACTGCCTTAGCAATGGCTGTTGAGAAGGTTGGCAGCACCAACTTTGGGTTTCGCATGAGAAATGTCTCTAGCAGCATAACTGATCTTGAAAGTTTTGGAATTTCTGACAAGGGTGAAATGCTGCGTGAAGCTTTATCAAACACTAAATTTAGAGGCCTCAGTGGGGTGTTCAACGTCTTTGATGGGCAATTGCAGGCATCAACTTTTGAGATAATAAATGTGATGAGTAACGGGGAAAGAAGTGTTGGATTTTGGACGGCAAAGAATGGATTAGTCAGGAATCTGGGTTCAATAAACACAAGCACATATTCTGCATCCAAGAACAATTTAGGACTCATCATCTGGCCAGGTGACACTTCCTCTGTTCCAAAAGGTTGGGAAAATCCCATAAATGCAAACAAGTTGAGAATCGGAGTTCCAGTAAAAGACGGTTATACAGAATTTGTGAATATAGAACATGACCATGGCACTAATCAAACACATGTCACTGGATTCTGCATCGCTGTTTTTGAGGCAGTGCTCAAAGTATTGCCTTATGCCCTGCCATACGAATTCATCCCCTTTGCCAAACCTGACGGAGAGAGTGCTGGAACATACAATGAATTGGTTAGCCAAGTCTATTTTGGGAAGTTTGATGCTGTTGTGGGGGACACAACGATCACCGCAAACAGGTCCAATTATGTGGACTACACTCTACCGTACACAGAATCAGGTGTAACAATGGTTGTTCCAGTAAAAGACAGTAGGAGGAAGAATGCGTGGACCTTCTTAAAGCCATTGACTTGGGATCTTTGGGTAACAACAGCTTGCTCGTTCCTATTCATTGGATTTGTTGTATGGATCCTCGAACACCGCATCAATGAAAACTTTAGAGGGCCTCCTTCGTATCAGATTGGCACCAGCTTATGGTTTTCTTTCTCAACCATGGTATTTTCCCATCGGGAGAAGGTAGTGAGCAACTTGGGTAGATTTGTGGTCACAGTTTGGGTTTTTGTGGTTCTAATTCTGATCCAAAGCTACACAGCAAGCCTGACTTCTCTCTTAACAGTCGATCAGCTTCGTCCTGCTCTTACAGATGTGAATCAACTTATAAAGAATAGGCTAAGCGTTGGTTATCAAGAAGGTTCTTTTGTGTATGGAATGCTGAAGGACATGGGTTTTCAAGATTACCAGCTCAAAGTTTACAATTCTACAGCGCACTGCAATGAGCTTTTCATGAAAGGAAGTGCAAATGGAGGCATTGCTGCTGCTTTCGATGAAATCCCTTACGTGAAACTCTTCCTTGCAAAATACTGCTCCAAGTATGCCATGGTTGAACCTACATTTAGAACAGCGGGCTTTGGCTTTGTATTCCCAAAAGGTTCCCCTGTTGTGGCCGACATTTCAAGGGCGATATTGAATGTGACTCAGGGAGATGAAATGAAGAGAATTGAGAGGGCCTGGTTCCAGAAGAGCAGCTGCCCAGATTATGACACAGCACTTTCTTCTAATACTAACAGTTTAGGCCTTGAGAGCTTTTGGGGCCTATTTCTAATTGCAGGGATTGCTTCTGTATCAGCTCTCATAGTTTTTGCCGTTACATTCCTCTACAAGCATAGACATATATTGCTAAGCTATAATCCCAATACCTCAATATGGAGACGAATTGGCATATTGGTAAGGATCTTTGACCAAAGAGATCTGAGCTCTCACACTTTCAGGAAAAATGAAAGTAGCAGCAGACATGGCTTGAGTGCAGTTGAGCTCTCTCCGTCCACAGACTGTCCTCCAACTCCATCCAGCCACACAGAAACTTTCTCTCCACACTACGCTGATAATAATAATAATCCATATATTCATGCTCAAAGGGATCCCTCCAATCAATTTTCCTCAGCTTTCTCATAG 2682 0.4295 MMEKTRAKLVQPLILSWSLCLLVGMGMAQRNAAVAVKVGVVLDLDKEIGKMGLSCINMSLTDFYYSHSNYNTRLVFNVRDSRNDVVTAAAQAQVDAISSIVQAFGWREAVPIYVDNEFGKGVIPFLTNALQQVYARIPYLSAISPSATDQDIRTELYKLMTMQTRVFVVHMAPNTGSRLFTIAKQIGMMKQGYVWIVSDGIANLLNFLNYSVIESMEGVLGLRTYIPRTQELDNFKIRWKRKLIQDYPNLVDINLNAFGIWAYDATTALAMAVEKVGSTNFGFRMRNVSSSITDLESFGISDKGEMLREALSNTKFRGLSGVFNVFDGQLQASTFEIINVMSNGERSVGFWTAKNGLVRNLGSINTSTYSASKNNLGLIIWPGDTSSVPKGWENPINANKLRIGVPVKDGYTEFVNIEHDHGTNQTHVTGFCIAVFEAVLKVLPYALPYEFIPFAKPDGESAGTYNELVSQVYFGKFDAVVGDTTITANRSNYVDYTLPYTESGVTMVVPVKDSRRKNAWTFLKPLTWDLWVTTACSFLFIGFVVWILEHRINENFRGPPSYQIGTSLWFSFSTMVFSHREKVVSNLGRFVVTVWVFVVLILIQSYTASLTSLLTVDQLRPALTDVNQLIKNRLSVGYQEGSFVYGMLKDMGFQDYQLKVYNSTAHCNELFMKGSANGGIAAAFDEIPYVKLFLAKYCSKYAMVEPTFRTAGFGFVFPKGSPVVADISRAILNVTQGDEMKRIERAWFQKSSCPDYDTALSSNTNSLGLESFWGLFLIAGIASVSALIVFAVTFLYKHRHILLSYNPNTSIWRRIGILVRIFDQRDLSSHTFRKNESSSRHGLSAVELSPSTDCPPTPSSHTETFSPHYADNNNNPYIHAQRDPSNQFSSAFS 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g02036 893 FunFam Glutamate receptor 2.7 656 755 - -
Bach3g02036 893 FunFam Glutamate receptor 400 519 - -
Bach3g02036 893 PIRSF IGluLR_plant 6 93 IPR017103 -
Bach3g02036 893 PIRSF IGluLR_plant 87 887 IPR017103 -
Bach3g02036 893 Gene3D - 289 399 - -
Bach3g02036 893 FunFam Glutamate receptor 519 649 - -
Bach3g02036 893 Pfam Receptor family ligand binding region 90 340 IPR001828 -
Bach3g02036 893 Pfam Ligand-gated ion channel 750 782 IPR001320 GO:0015276|GO:0016020
Bach3g02036 893 FunFam Glutamate receptor 300 399 - -
Bach3g02036 893 CDD GluR_Plant 399 748 - -
Bach3g02036 893 Gene3D - 695 755 - -
Bach3g02036 893 MobiDBLite consensus disorder prediction 833 893 - -
Bach3g02036 893 FunFam Glutamate receptor 95 253 - -
Bach3g02036 893 Pfam Bacterial extracellular solute-binding proteins, family 3 426 749 IPR001638 -
Bach3g02036 893 SUPERFAMILY Periplasmic binding protein-like I 89 392 IPR028082 -
Bach3g02036 893 MobiDBLite consensus disorder prediction 838 893 - -
Bach3g02036 893 CDD PBP1_GABAb_receptor_plant 42 361 IPR044440 -
Bach3g02036 893 Gene3D - 90 255 - -
Bach3g02036 893 Gene3D - 520 645 - -
Bach3g02036 893 SMART GluR_14 400 750 IPR001320 GO:0015276|GO:0016020
Bach3g02036 893 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 36 833 IPR015683 -
Bach3g02036 893 SUPERFAMILY Periplasmic binding protein-like II 377 750 - -
Bach3g02036 893 Gene3D - 400 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g02036 Bach-Chr3 27963066 27966465 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g02036 19 863 Ion Channels AT2G29120 48.908 0.0 821
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g02036 K05387 - qsa:O6P43_019170 1145.18