Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g02035 ATGGAGAGCCCTAGTGCCAAACTAGTTCAGGCTCTGATATTGTATTGGTCTCTCTGTTTGTTGGTTGGTATGGGCATGGCGCAAAGAAACGCAGCAGTGGCAGTGAAAGTGGGAGTGGTACTTGATCTTGATAAAGAGATAGGGAAGATGGGGTTGAGCTGCATCAACATGTCCCTTACAGACTTCTATTACTCTCATTCTAATTACAACACCAGGCTCGTTTTTAACGTCAGAGACTCCCGCAACGATGTTGTTACTGCCGCTGCTCAAGCTCTAGATCTCATAAAAGACGAACAAGTTAAAGCCATCATTGGGCCAATAACTTCAATGGAGGCGGGGTTTATAATTGGCCTTGGAGACAAAGCTCATGTCCCTATCCTAAGCTTCTCAGCAACAAGTCCTTCCCTCACTTCACTTGGGAGTCCATATTTTTTCCGAATTGCCCAAAATGATTCAGCTCAAGTTGATGCCATCAGTTCAATCGTCCAAGCTTTTGGGTGGAGAGAAGCAGTGCCCATTTACGTAGACAACGAATTTGGCAAAGGAGTCATACCCTTCTTAACCAATGCTCTCCAAAAAGTCTATGCCCGAATTCCCTATCTCTCTGCCATTTCTCCTTCAGCCACAGATCAAGACATCAGAACGGAGCTCTACAAGTTGATGACTATGCAAACCAGAGTCTTTGTTGTGCACATGGAGCCCAATATTTGCTCTCGGCTCTTCACCATAGCAAAGCAGATTGGAATGATGAAGGAGGGTTATGTTTGGATTGTGAGCGATGGCATTGCTAATTTGTTGAACTTCTTGAATTATTCAGTCATAGAATCCATGGAAGGAGTCCTGGGTGTGAGAACCTATATTCCAAGAACACAAGAGCTTGATAATTTTAAAATTCGATGGAAGAGGAAATTCCTACAGGACTATCCAAACCTTGTCGATACAAACTTGAATGTTTTTGGAATATGGGCTTATGATGCTACCACTGCCTTAGCAATGGCTGTGGAGAAGGTTGGCAGCACCAACTTTGGGTTTCGCATGAGAAATGACTCTAGCAGCATAACTGATCTTGAAAGGTTTGGAATTTCTGACAAGGGGGAAAAGCTGCGTGAAGCTTTATCAAACACTAAATTTAGAGGCCTCGGTGGAGTGTTCAACGTTGTTGATGGGCAATTGCAAGCATCAACTTTTGAGATAATAAATGTGATGAGTAACGGGGAAAGGAGTGTTGGATTTTGGACGTCAAAGAATGGATTAGTTAGGAATCTGGGTTCAATATACACAAGCACATATTCTGCATCCAAGAACAATTTAGGACCCATCATCTGGCCAGGTGACACTTCCTCTTTTCCAAAAGGTTGGGAGAATCCCACAAATGCAAACAAGTTGAGAATCGGAGTTCCAGTAAAAGACGGTTATACAGAATTTGTGAGCATAAAACATGACCATAGCACTAATCAAACACATGTCACTGGATTCTGCATCGCTGTTTTTGAGGCAGTACTCAAAGTATTGCCTTACGCCCTGCCATACGAATTCATCCCCTTTGCAAAGCCTGACGGAGAGAGTGCTGGAACATACGATGAATTAGTTAGCCAAGTCTATTTCGAGAAGTTTGATGCTGTTGTGGGGGACATAAGTATTATTGCAATCAGGTCCAATTACGTGGACTACACTCTACCGTACACAGAATCAGGAGTAACAATGGTTGTTCCAATAAAAGACAGTAGGAGGAAGAATGCGTGGACCTTCTTAAAGCCATTGACTTGGGATCTTTGGGTAACAACCGCTTGTTTGTTTCTATTCATTGGATTTGTTGTATGGATCCTCGAACACCGCATCAATGAAAACTTTAGAGGGCCTCCTTCTTATCAGATCAGCACCAGCTTATGGTTTTCTTTCTCAACTATGGTGTTTTCCCATCGGGAGAAGGTAGTGAGCAACTTGGGTAGATTTGTGGTCACAGTATGGGTTTTTGTGGTTCTCATTCTGATTCAAAGCTATACTGCGAGCCTGACATCCCTCTTAACAGTTGAGCAGCTTCGTCCAACTCTTACAGATGTGAATCAACTTATAGAGAATAGGTTAAGTGTTGGTTATCTAAAAGATTCTTTCGTGTACGGAATGCTGAAGGACATGGGATTTCAAGATTACCAGCTCAAAGTTTACAATTCTACAGAGCACTGCAATGATCTTTTCATGAAAGGAAGTGCGAATGGAGGCATTGCTGCTGCTTTCGACGAAGTCCCTTACGTAAAACTCTTTCTTGCAAAATACTGCTCCAAGTATGCCATGGTTGAACCTACATTTAGAACCGGGGGCTTTGGCTTTGTATTCCCGAAAGGTTCCCCTCTCGGGGCTGACATTTCAAGGGCGATATTGAATGTGACTCAGGGTGATGAAATGAAAAGAATTGAGAGGGCATGGTTCCCGAGGAGCAGTTGCCCAGAGTCTGATACAGCAATTTCTTCTAATACTAATAGTCTAGGCCTTGACAGTTTCTGGGGCCTATTTCTAATTGCAGGGGTTGCCTCTCTATCAGCTCTCATAGTTTTTGCAGTTACATTCCTCTACAAGCATAGACATATATTAAGCTATAATGCCAATACCTCAATATGGAGAAGAATTGGTATATTGCTAAGGATCTTTGACCAAAGAGATATGAGCTCTCACACTTTCAGAAAAAGTGAAACTAGCAGTAGTGATATTTTGAGTTCGGTTGAGCTCTCTCCAACTACGCACTCTCCACCAAGTTCATCCAGCCACAAAGGAATGTTCTCTCCACACTTGGCTGATATAAACCCATATACTAATGCTCATGCTCATGAGCCTCAAGAGACCCCTCCAATCAATTCTCAACATTAA 2862 0.4273 MESPSAKLVQALILYWSLCLLVGMGMAQRNAAVAVKVGVVLDLDKEIGKMGLSCINMSLTDFYYSHSNYNTRLVFNVRDSRNDVVTAAAQALDLIKDEQVKAIIGPITSMEAGFIIGLGDKAHVPILSFSATSPSLTSLGSPYFFRIAQNDSAQVDAISSIVQAFGWREAVPIYVDNEFGKGVIPFLTNALQKVYARIPYLSAISPSATDQDIRTELYKLMTMQTRVFVVHMEPNICSRLFTIAKQIGMMKEGYVWIVSDGIANLLNFLNYSVIESMEGVLGVRTYIPRTQELDNFKIRWKRKFLQDYPNLVDTNLNVFGIWAYDATTALAMAVEKVGSTNFGFRMRNDSSSITDLERFGISDKGEKLREALSNTKFRGLGGVFNVVDGQLQASTFEIINVMSNGERSVGFWTSKNGLVRNLGSIYTSTYSASKNNLGPIIWPGDTSSFPKGWENPTNANKLRIGVPVKDGYTEFVSIKHDHSTNQTHVTGFCIAVFEAVLKVLPYALPYEFIPFAKPDGESAGTYDELVSQVYFEKFDAVVGDISIIAIRSNYVDYTLPYTESGVTMVVPIKDSRRKNAWTFLKPLTWDLWVTTACLFLFIGFVVWILEHRINENFRGPPSYQISTSLWFSFSTMVFSHREKVVSNLGRFVVTVWVFVVLILIQSYTASLTSLLTVEQLRPTLTDVNQLIENRLSVGYLKDSFVYGMLKDMGFQDYQLKVYNSTEHCNDLFMKGSANGGIAAAFDEVPYVKLFLAKYCSKYAMVEPTFRTGGFGFVFPKGSPLGADISRAILNVTQGDEMKRIERAWFPRSSCPESDTAISSNTNSLGLDSFWGLFLIAGVASLSALIVFAVTFLYKHRHILSYNANTSIWRRIGILLRIFDQRDMSSHTFRKSETSSSDILSSVELSPTTHSPPSSSSHKGMFSPHLADINPYTNAHAHEPQETPPINSQH 953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g02035 953 SMART GluR_14 461 811 IPR001320 GO:0015276|GO:0016020
Bach3g02035 953 Gene3D - 580 709 - -
Bach3g02035 953 Gene3D - 756 816 - -
Bach3g02035 953 Gene3D - 462 579 - -
Bach3g02035 953 SUPERFAMILY Periplasmic binding protein-like II 440 811 - -
Bach3g02035 953 CDD PBP1_GABAb_receptor_plant 41 422 IPR044440 -
Bach3g02035 953 FunFam Glutamate receptor 156 314 - -
Bach3g02035 953 Pfam Receptor family ligand binding region 55 401 IPR001828 -
Bach3g02035 953 Gene3D - 152 316 - -
Bach3g02035 953 Pfam Ligand-gated ion channel 811 843 IPR001320 GO:0015276|GO:0016020
Bach3g02035 953 Gene3D - 361 461 - -
Bach3g02035 953 CDD GluR_Plant 460 809 - -
Bach3g02035 953 FunFam Glutamate receptor 361 460 - -
Bach3g02035 953 Pfam Bacterial extracellular solute-binding proteins, family 3 487 810 IPR001638 -
Bach3g02035 953 PIRSF IGluLR_plant 6 941 IPR017103 -
Bach3g02035 953 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 35 895 IPR015683 -
Bach3g02035 953 MobiDBLite consensus disorder prediction 903 953 - -
Bach3g02035 953 FunFam Glutamate receptor 2.7 717 816 - -
Bach3g02035 953 SUPERFAMILY Periplasmic binding protein-like I 34 444 IPR028082 -
Bach3g02035 953 MobiDBLite consensus disorder prediction 903 924 - -
Bach3g02035 953 FunFam Glutamate receptor 580 710 - -
Bach3g02035 953 MobiDBLite consensus disorder prediction 939 953 - -
Bach3g02035 953 FunFam Glutamate receptor 461 580 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g02035 Bach-Chr3 27957830 27961355 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g02035 18 895 Ion Channels AT2G29120 52.721 0.0 919
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g02035 K05387 - qsa:O6P43_019170 1261.9