Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01999 ATGGATGATCCCAGAGACCAATTTCCTGTAGGAATGCGTGTTCTCGCCGTTGACGATGATCCCACTTGTCTCTTGGTGTTGGAAGCTCTGCTTCGAAGATGTCAATATCACGTAACGGCAACCAGTCAGGCGACAGCGGCATTGAAGATGTTGAGAGAAAACAAAGATAAGTTTGACCTGGTCATCAGTGATGTTCATATGCCAGACATGGATGGATTTAAGCTGCTAGAGCTTGTGGGACTTGAAATGGACCTCCCTGTCATAATGTTGTCTGCAAACGGTGATCCGAAGCTGGTGATGAAGGGAATAACTCATGGAGCTTGTGATTATCTTCTGAAACCTGTTCGAATTGAGGAGCTAAAGAACATTTGGCAGCATGTAATCCGAAGGAAGAAGTTTGACGCAAAGGATCGGAACAAAGGCGGTAACCAACATAAAGCTCATTCTGGTAGCAGCAATGGACTAGGGTCAGCAGGTACTGGAAATTCAGATCAAAATGGAAAGCTAACCAAAAAAAGGAAAGATCAGGATGAAGACGAAGATGAGGAAAATGAGGATGGTCATGAAAATGAAGACCCCTCAACTCAGAAGAAGCCTAGAGTTGTTTGGTCTGTGGAGCTGCACCGCAAGTTTGTTGCTGCTGTTAATCAGTTAGGCATTGATAAGGCTGTACCAAAGAAAATTCTTGATTTGATGAATGTTGAAAAGCTTACGAGGGAGAATGTAGCAAGCCATCTCCAGAAATACAGGCTTTATCTGAAGAGAATTAGCTGTGTGGCAAACCAACAGGCTAACATGGTTGCAGCTTTAGGTAGTGCAGATTCATCCTATTTGAGAATGAGTTCTCTGAGTGGGCTTGGACATTTACAAACATTGAATGGTTCTGGGCAGTTCCAGAACAATGTTTTCAAATCTTTCTCTCCTAGTGGAATCATTGGTAGATTGAACACTCCTGCTGGTCTTGGTGTGCATGGGTTGCCTTCTTCTGGAATTCTTCCGTTGGGTCATGGCCAGAGTTTAAACAATTCCATGAATGATCAACTCAAGTTTCCATCAACCATAGTTGGTGGTAACCAGAATGCTAGTGCAATTCAGGGTATGCCGGCGTCTATAGGGCTTGATCAATTAAGACAAAATAAGGCCATTAATTCTCTTGAGGACCTGGCCACTGGTATTGGTGATAGAACAATTTTGACCATCCCAAATAAGTTAACAGATCCAAGAGCGCGCACACCACTTATGGGTGTCACAAATAACTCATTCATGTTAGAAGCACAAGGGGTTAGGGGATATGAGAATCTATCTTCAGTAACCTCTCAACATTCAGAATTTTCTTTATCTTCACTGGATCATGGTAGGTGTAGTGATAATTGGTCAACTGCTGTGCAGTCATCTGGGATCCACCGAAATTCTTCTTATCCGTCGACTCAATGTTTTAGACAGGTTGCTTTGTCTCCTACAGATAGCATGCCTTCTACACCTATGCATGTGTCAAATCCAAGTGCTACTTCATCAGTCACTTCTCACTCCACTCAATCCCATGATTCAATAACAGATATGCACTCCAAAGGACCCATTTTTACTAATTCACCTTTGCAAGTTACCAATATTGCCCCTTTTCAAGGCTGGGACGACCATAATCAGGATGCTAATTACCATTCAATCAACTCTCTCATTCCTGCAAATGGTGCTTTTGGTCCCTCAGGGCGTGCTCCAATAAACTCAACTTTCCACAGGAACTTGGACTTTGATGTTGGTGACCTTTTACAGATGAAGCAGGAAGAGGTGACCGAATTGTCTAAAGAGACCCTGTTAAAACCAAATCATGGGTATATAATGGACCAACAGAAGGCACAACACAGTCGCATCTCTAATAACCTTGGTTCATTGGAAGACTTGGTCAGTGCAATGATGAAACAGGAACAAAACAAGGTGAAGTTAATGGAAGGAGAGTTCATATGTGATGGTTACTCTGGTGGGACATCTATGTGA 1992 0.4282 MDDPRDQFPVGMRVLAVDDDPTCLLVLEALLRRCQYHVTATSQATAALKMLRENKDKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSANGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKFDAKDRNKGGNQHKAHSGSSNGLGSAGTGNSDQNGKLTKKRKDQDEDEDEENEDGHENEDPSTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRISCVANQQANMVAALGSADSSYLRMSSLSGLGHLQTLNGSGQFQNNVFKSFSPSGIIGRLNTPAGLGVHGLPSSGILPLGHGQSLNNSMNDQLKFPSTIVGGNQNASAIQGMPASIGLDQLRQNKAINSLEDLATGIGDRTILTIPNKLTDPRARTPLMGVTNNSFMLEAQGVRGYENLSSVTSQHSEFSLSSLDHGRCSDNWSTAVQSSGIHRNSSYPSTQCFRQVALSPTDSMPSTPMHVSNPSATSSVTSHSTQSHDSITDMHSKGPIFTNSPLQVTNIAPFQGWDDHNQDANYHSINSLIPANGAFGPSGRAPINSTFHRNLDFDVGDLLQMKQEEVTELSKETLLKPNHGYIMDQQKAQHSRISNNLGSLEDLVSAMMKQEQNKVKLMEGEFICDGYSGGTSM 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01999 663 NCBIfam myb-like DNA-binding domain, SHAQKYF class 198 251 IPR006447 GO:0003677
Bach3g01999 663 Pfam Response regulator receiver domain 14 122 IPR001789 GO:0000160
Bach3g01999 663 Pfam Myb-like DNA-binding domain 200 250 IPR001005 -
Bach3g01999 663 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 195 254 IPR017930 -
Bach3g01999 663 SUPERFAMILY Homeodomain-like 195 255 IPR009057 -
Bach3g01999 663 SMART REC_2 12 124 IPR001789 GO:0000160
Bach3g01999 663 Gene3D - 194 257 - -
Bach3g01999 663 MobiDBLite consensus disorder prediction 145 166 - -
Bach3g01999 663 MobiDBLite consensus disorder prediction 485 517 - -
Bach3g01999 663 PIRSF RR_ARR_type-B 1 661 IPR017053 GO:0003677|GO:0003700|GO:0009736
Bach3g01999 663 ProSiteProfiles Response regulatory domain profile. 13 128 IPR001789 GO:0000160
Bach3g01999 663 SUPERFAMILY CheY-like 11 133 IPR011006 -
Bach3g01999 663 MobiDBLite consensus disorder prediction 135 200 - -
Bach3g01999 663 CDD REC_typeB_ARR-like 14 128 - -
Bach3g01999 663 FunFam Two-component response regulator 194 257 - -
Bach3g01999 663 Gene3D - 11 149 - -
Bach3g01999 663 PANTHER TWO-COMPONENT RESPONSE REGULATOR 12 354 IPR045279 GO:0009736
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01999 Bach-Chr3 27723462 27727756 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01999 6 663 Response Regulator Gene Family AT2G25180 43.769 1.76e-142 426
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Bach3g01999 Response_reg 1.1e-23 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01999 K14491 - gmx:100809002 845.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach3g01999 3 27723462 27727756 Bach12g00459 12 3131389 3136015 BWGD