LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach3g01999	ATGGATGATCCCAGAGACCAATTTCCTGTAGGAATGCGTGTTCTCGCCGTTGACGATGATCCCACTTGTCTCTTGGTGTTGGAAGCTCTGCTTCGAAGATGTCAATATCACGTAACGGCAACCAGTCAGGCGACAGCGGCATTGAAGATGTTGAGAGAAAACAAAGATAAGTTTGACCTGGTCATCAGTGATGTTCATATGCCAGACATGGATGGATTTAAGCTGCTAGAGCTTGTGGGACTTGAAATGGACCTCCCTGTCATAATGTTGTCTGCAAACGGTGATCCGAAGCTGGTGATGAAGGGAATAACTCATGGAGCTTGTGATTATCTTCTGAAACCTGTTCGAATTGAGGAGCTAAAGAACATTTGGCAGCATGTAATCCGAAGGAAGAAGTTTGACGCAAAGGATCGGAACAAAGGCGGTAACCAACATAAAGCTCATTCTGGTAGCAGCAATGGACTAGGGTCAGCAGGTACTGGAAATTCAGATCAAAATGGAAAGCTAACCAAAAAAAGGAAAGATCAGGATGAAGACGAAGATGAGGAAAATGAGGATGGTCATGAAAATGAAGACCCCTCAACTCAGAAGAAGCCTAGAGTTGTTTGGTCTGTGGAGCTGCACCGCAAGTTTGTTGCTGCTGTTAATCAGTTAGGCATTGATAAGGCTGTACCAAAGAAAATTCTTGATTTGATGAATGTTGAAAAGCTTACGAGGGAGAATGTAGCAAGCCATCTCCAGAAATACAGGCTTTATCTGAAGAGAATTAGCTGTGTGGCAAACCAACAGGCTAACATGGTTGCAGCTTTAGGTAGTGCAGATTCATCCTATTTGAGAATGAGTTCTCTGAGTGGGCTTGGACATTTACAAACATTGAATGGTTCTGGGCAGTTCCAGAACAATGTTTTCAAATCTTTCTCTCCTAGTGGAATCATTGGTAGATTGAACACTCCTGCTGGTCTTGGTGTGCATGGGTTGCCTTCTTCTGGAATTCTTCCGTTGGGTCATGGCCAGAGTTTAAACAATTCCATGAATGATCAACTCAAGTTTCCATCAACCATAGTTGGTGGTAACCAGAATGCTAGTGCAATTCAGGGTATGCCGGCGTCTATAGGGCTTGATCAATTAAGACAAAATAAGGCCATTAATTCTCTTGAGGACCTGGCCACTGGTATTGGTGATAGAACAATTTTGACCATCCCAAATAAGTTAACAGATCCAAGAGCGCGCACACCACTTATGGGTGTCACAAATAACTCATTCATGTTAGAAGCACAAGGGGTTAGGGGATATGAGAATCTATCTTCAGTAACCTCTCAACATTCAGAATTTTCTTTATCTTCACTGGATCATGGTAGGTGTAGTGATAATTGGTCAACTGCTGTGCAGTCATCTGGGATCCACCGAAATTCTTCTTATCCGTCGACTCAATGTTTTAGACAGGTTGCTTTGTCTCCTACAGATAGCATGCCTTCTACACCTATGCATGTGTCAAATCCAAGTGCTACTTCATCAGTCACTTCTCACTCCACTCAATCCCATGATTCAATAACAGATATGCACTCCAAAGGACCCATTTTTACTAATTCACCTTTGCAAGTTACCAATATTGCCCCTTTTCAAGGCTGGGACGACCATAATCAGGATGCTAATTACCATTCAATCAACTCTCTCATTCCTGCAAATGGTGCTTTTGGTCCCTCAGGGCGTGCTCCAATAAACTCAACTTTCCACAGGAACTTGGACTTTGATGTTGGTGACCTTTTACAGATGAAGCAGGAAGAGGTGACCGAATTGTCTAAAGAGACCCTGTTAAAACCAAATCATGGGTATATAATGGACCAACAGAAGGCACAACACAGTCGCATCTCTAATAACCTTGGTTCATTGGAAGACTTGGTCAGTGCAATGATGAAACAGGAACAAAACAAGGTGAAGTTAATGGAAGGAGAGTTCATATGTGATGGTTACTCTGGTGGGACATCTATGTGA	1992	0.4282	MDDPRDQFPVGMRVLAVDDDPTCLLVLEALLRRCQYHVTATSQATAALKMLRENKDKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSANGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKFDAKDRNKGGNQHKAHSGSSNGLGSAGTGNSDQNGKLTKKRKDQDEDEDEENEDGHENEDPSTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRISCVANQQANMVAALGSADSSYLRMSSLSGLGHLQTLNGSGQFQNNVFKSFSPSGIIGRLNTPAGLGVHGLPSSGILPLGHGQSLNNSMNDQLKFPSTIVGGNQNASAIQGMPASIGLDQLRQNKAINSLEDLATGIGDRTILTIPNKLTDPRARTPLMGVTNNSFMLEAQGVRGYENLSSVTSQHSEFSLSSLDHGRCSDNWSTAVQSSGIHRNSSYPSTQCFRQVALSPTDSMPSTPMHVSNPSATSSVTSHSTQSHDSITDMHSKGPIFTNSPLQVTNIAPFQGWDDHNQDANYHSINSLIPANGAFGPSGRAPINSTFHRNLDFDVGDLLQMKQEEVTELSKETLLKPNHGYIMDQQKAQHSRISNNLGSLEDLVSAMMKQEQNKVKLMEGEFICDGYSGGTSM	663

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Bach3g01999	663	NCBIfam	myb-like DNA-binding domain, SHAQKYF class	198	251	IPR006447	GO:0003677
Bach3g01999	663	Pfam	Response regulator receiver domain	14	122	IPR001789	GO:0000160
Bach3g01999	663	Pfam	Myb-like DNA-binding domain	200	250	IPR001005	-
Bach3g01999	663	ProSiteProfiles	Myb-type HTH DNA-binding domain profile.	195	254	IPR017930	-
Bach3g01999	663	SUPERFAMILY	Homeodomain-like	195	255	IPR009057	-
Bach3g01999	663	SMART	REC_2	12	124	IPR001789	GO:0000160
Bach3g01999	663	Gene3D	-	194	257	-	-
Bach3g01999	663	MobiDBLite	consensus disorder prediction	145	166	-	-
Bach3g01999	663	MobiDBLite	consensus disorder prediction	485	517	-	-
Bach3g01999	663	PIRSF	RR_ARR_type-B	1	661	IPR017053	GO:0003677\|GO:0003700\|GO:0009736

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach3g01999	Bach-Chr3	27723462	27727756	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach3g01999	6	663	Response Regulator Gene Family	AT2G25180	43.769	1.76e-142	426

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	GARP-ARR-B	Bach3g01999		Response_reg	1.1e-23	CL0304

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach3g01999	K14491		-	gmx:100809002	845.499

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bach3g01999	3	27723462	27727756	Bach12g00459	12	3131389	3136015	BWGD

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