Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01964 ATGGAGCTTCACTTAAGTCTGGCTCTCCCAACCCACAATCCAATTGAGGGATTCGACCGAACAAACCATGTCTTAGAATCAAAACAGAAGGTGGGTTCAGAATCAAGGGCACGAAGTTTCTGCGTGGAAAGGCAAAAGCATTTGAAAAATAAGCGTAGCTTCCAAGATTCCTTTGGACATTCTTTGACTGTGTCTTCAGACTCTTTACTGGTATGGAGCGGACAACCAAATGAAGAAGATGAGCGCAATGGAAATAAAAACAGGAACACTGACACAACAACCAAGAATGACAAAGAATTAGTGGTGGGTTGGCCACCAATTAAAGAATGGAGGAAGAAGAAACTCCATCTGCATCAACATCATGAAGACCAGATCAGAAATAATAGGGAACCGGCAGAGAATAAAGGCAGAGGATCAAACTCCTTATACGTCAAAGTGAAGATGGAGGGGGTAGCAATAGGAAGAAAGATCGATTTAAGACTCTATAACTCTTATAGGACTCTGACAAACACGTTGATTAGTATGTTTGCCAACTACCAAAACTTTAAGGAAGAAAGGGCAAGTTATACACTTACCTATCAAGACGAAGAAGGGGATTGGCTAATTGCTGGGGATGTTCCGTGGCAATCCTTCGTTGATTCCGTGCAGCGTTTGGAGATATTAAGGAATGGCAATGAAACTACTTGA 687 0.4192 MELHLSLALPTHNPIEGFDRTNHVLESKQKVGSESRARSFCVERQKHLKNKRSFQDSFGHSLTVSSDSLLVWSGQPNEEDERNGNKNRNTDTTTKNDKELVVGWPPIKEWRKKKLHLHQHHEDQIRNNREPAENKGRGSNSLYVKVKMEGVAIGRKIDLRLYNSYRTLTNTLISMFANYQNFKEERASYTLTYQDEEGDWLIAGDVPWQSFVDSVQRLEILRNGNETT 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01964 228 Pfam AUX/IAA family 5 225 IPR033389 -
Bach3g01964 228 MobiDBLite consensus disorder prediction 79 95 - -
Bach3g01964 228 Gene3D - 136 228 - -
Bach3g01964 228 ProSiteProfiles PB1 domain profile. 141 228 IPR000270 GO:0005515
Bach3g01964 228 SUPERFAMILY CAD & PB1 domains 138 220 - -
Bach3g01964 228 MobiDBLite consensus disorder prediction 74 96 - -
Bach3g01964 228 MobiDBLite consensus disorder prediction 116 138 - -
Bach3g01964 228 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 5 223 IPR003311 GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01964 Bach-Chr3 27481934 27482999 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01964 132 220 B3 DNA Binding Superfamily AT3G61830 34.831 6.17e-12 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Bach3g01964 AUX_IAA 4.7e-41 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01964 K14484 - qsa:O6P43_019450 245.743