Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01955 ATGACGACTTTGCTACATGGGACCCTTCTTGTGACCATATTTCAAATAGATAGGCTATACCATGGATTCAAGTTCGATTTCTGTCGACAGGGTACAAGAAACCGGGGGAAGAAAGCTCTGGCCCAACTCAAGAGTTGTATATCGTGCTACTGCCAACCTGAGATGGCTGAGATGAGTCTCTATGCAACAGTTGATTTAGATAAGGCAAGGGTTGGTCGGACGAGAATGTTAGAAATTGAACCCTCCAGCCCTCAGTGGAACGAGACCTTTCACGTATACTGTGCTCATCAGATCTCACATATTATATTCACTGTCAAAGAAAATAACCCCGTTGGAGCAACTCTAATTGGGAGAGCTTATGTGCCAGTTGAGCAAGTCATGAGTGGCAACATAGTAGACACATGGGCTAAAATTTTAGATGAAGACCATCGTCCTATACCAGGTGGTTCTAAAATCCATGTTAAGATGCAATTCTCCCATGTTAGCAATGACAAACACTGGTCTCAAGGAATAATGACTCCACGTTTTCGTGGAGTCCCTCGTGTATTTTTCCATCAAAGGAATGGTTGCAAAGTTACCTTGTATCAAGATGCCCATGTACTAGATGGTTCTCTGCCTTATATCCCACTCTCTGGAAAATCTTATGAGCCTGCTAGATGCTGGGAAGATATCTTCGAAGCCATTATGGATGCTAAGCATTTAATTTACATAACTGGCTGGTCTGTGTACACTGAAATAACCTTGATTAGAGATCCAAACAGGTACGTTCCTGAGGGAAACATAACCCTTGGGGATCTGCTCAAGATAAAAGCTGATCAAGGAGTCAAGGTACTTATGCTAGTTTGGGATGACAAAACCTCTGATGAACAACTGAAACAATTGAAAAAAGATGGCTTGATGGCAACCCATGATCTGGAAACTGAAGAATACTTTCGTAACACAAATGTACATTGTGTTCCGTGCTCTCGTAAAACTAGGAGAAGCATAGTTCAAGACTTTGAAATTTCAACAATGTTCACTCACCACCAGAAGACTGTAGTTGTTGACAGTGAAGTATCTCATGGAGAATTCAAGCGGAGGATAGTAAGTTTTGTTGGCGGTATTGATCTCTGTGATGGGAGATATGACATACAAGAACACCCTTTATTTTCAACTCTAAATTCAATGCATTCTGATGATTTTCATCAGCCAAACTTCCCAGGTGCTTCGATTAAGAAAGGTGGTCCAAGGGAGCCTTGGCATGATATTCATTGCCGACTAGAAGGCCCAGTGGCTTGGGATGTCTTGCACAATTTTGAGCAAAGGTGGGAGAAGCAAGTTGGGCACCAATCCCTACTCCCAGCTAGCCAGCTGAATGAAATTCTAGTCCCTCCATCTTTTGTAACGACTTCAAATGACCAACAGACTTGGTCTGTTCAATTGTTCAGGTCCATAGACGGTGATTCTGCTTATGGCTTCCCTCAAGACCCAAATGATGCAGCAGAAAGTGGCCTTGTTAGTGGAAAAGATAACATCATTGACAGAAGTATTCAGGATGCCTACATCAATGCTATTCGTCGAGCCAAAAATTTCATCTACATCGAAAATCAGTATTTCCTAGGGAGTTCATATGCTTGGCATGCATCTGATATCAAAGTCGAGGATATTGGAGCTTTGCACCTTATACCAAAGGAGCTGTCATTGAAGATTGTTAGCAAGATTGAAGCAGGAGAGAGATTTTCTGTCTACATTGTGATCCCAATGTGGCCAGAAGGCATACCTGAAAGCGCTTCAGTTCAAGCAATATTAGATTGGCAGAGGAGGACCATGGAGATGATGTATTCTGACATTACAGCAGCCATTCAAAAGAAGCGAATTAACGCCCACCCAAGAGATTATTTGACATTCTTCTGTCTTGGAAACAGGGAGGCCAAGAAATATGGAGAATATTCTCCTCCAGATAGACCAGAACCTGACAGTGATTACAGCAGAGCACAGAAAGCTAGGCGCTTCATGATATATGTTCATGCAAAGATGATGATAGTTGATGATGAATACATAATCATTGGATCTGCCAACATCAACCAGAGATCAATGGATGGTGCAAGGGACACTGAGATTGCAATGGGTGCATTCCAACCACACCATCTGACAGATAATGGAGCAGCCAGAGGTCAGATATATGGGTTCCGGCGAGCATTATGGTATGAGCATCTTGGGGATCTTCCTCAACAAGTCTTGGACAATCCAGAAAGTGAGGAATGCATCAAACTTGTGAATCATCTTGCTGAGAGGAATTGGGAAATATACTCAAAGGAAACATTTGATGAAGGTAGCCAATTTCACCACCTCATGCGCTACCCAGTACAAGTGACAGAGATTGGAACAGTAACAACACTGCCAGGGGTTGAATATTTTCCTGACACCAGGGCTCCTATTTTAGACTCCAAATCCCATAACCTCCCTCCAATTCTTACCACTTAG 2463 0.4263 MTTLLHGTLLVTIFQIDRLYHGFKFDFCRQGTRNRGKKALAQLKSCISCYCQPEMAEMSLYATVDLDKARVGRTRMLEIEPSSPQWNETFHVYCAHQISHIIFTVKENNPVGATLIGRAYVPVEQVMSGNIVDTWAKILDEDHRPIPGGSKIHVKMQFSHVSNDKHWSQGIMTPRFRGVPRVFFHQRNGCKVTLYQDAHVLDGSLPYIPLSGKSYEPARCWEDIFEAIMDAKHLIYITGWSVYTEITLIRDPNRYVPEGNITLGDLLKIKADQGVKVLMLVWDDKTSDEQLKQLKKDGLMATHDLETEEYFRNTNVHCVPCSRKTRRSIVQDFEISTMFTHHQKTVVVDSEVSHGEFKRRIVSFVGGIDLCDGRYDIQEHPLFSTLNSMHSDDFHQPNFPGASIKKGGPREPWHDIHCRLEGPVAWDVLHNFEQRWEKQVGHQSLLPASQLNEILVPPSFVTTSNDQQTWSVQLFRSIDGDSAYGFPQDPNDAAESGLVSGKDNIIDRSIQDAYINAIRRAKNFIYIENQYFLGSSYAWHASDIKVEDIGALHLIPKELSLKIVSKIEAGERFSVYIVIPMWPEGIPESASVQAILDWQRRTMEMMYSDITAAIQKKRINAHPRDYLTFFCLGNREAKKYGEYSPPDRPEPDSDYSRAQKARRFMIYVHAKMMIVDDEYIIIGSANINQRSMDGARDTEIAMGAFQPHHLTDNGAARGQIYGFRRALWYEHLGDLPQQVLDNPESEECIKLVNHLAERNWEIYSKETFDEGSQFHHLMRYPVQVTEIGTVTTLPGVEYFPDTRAPILDSKSHNLPPILTT 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01955 820 Gene3D Endonuclease Chain A 478 709 - -
Bach3g01955 820 Gene3D C2 domain 42 172 IPR035892 -
Bach3g01955 820 FunFam Phospholipase D 477 710 - -
Bach3g01955 820 FunFam Phospholipase D delta 211 454 - -
Bach3g01955 820 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 160 IPR035892 -
Bach3g01955 820 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 337 374 IPR001736 GO:0003824
Bach3g01955 820 Pfam C2 domain 55 137 IPR000008 -
Bach3g01955 820 SUPERFAMILY Phospholipase D/nuclease 166 442 - -
Bach3g01955 820 SMART C2_3c 8 135 IPR000008 -
Bach3g01955 820 PIRSF PLD_plant 1 820 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Bach3g01955 820 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 664 691 IPR001736 GO:0003824
Bach3g01955 820 SMART pld_4 337 374 IPR001736 GO:0003824
Bach3g01955 820 SMART pld_4 664 691 IPR001736 GO:0003824
Bach3g01955 820 Pfam Phospholipase D Active site motif 337 374 IPR001736 GO:0003824
Bach3g01955 820 Pfam Phospholipase D Active site motif 665 691 IPR001736 GO:0003824
Bach3g01955 820 SUPERFAMILY Phospholipase D/nuclease 494 741 - -
Bach3g01955 820 ProSiteProfiles C2 domain profile. 1 136 IPR000008 -
Bach3g01955 820 Gene3D Endonuclease Chain A 210 465 - -
Bach3g01955 820 CDD C2_plant_PLD 1 158 - -
Bach3g01955 820 Pfam Phospholipase D C terminal 738 808 IPR024632 -
Bach3g01955 820 PANTHER PHOSPHOLIPASE D 3 805 IPR015679 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01955 Bach-Chr3 27433754 27437025 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01955 4 820 Phospholipase D Gene Family (Wang group) AT3G15730 63.990 0.0 1074
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01955 K01115 - gmx:100791688 1225.31