Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01954 ATGTTGCAACTGCTACACGGAATGCTTGAGGTAACCATATTTGAAGTGGACAAGCTACACATTGGGTGCAACTTTGATTTTTGCAGGAAGATTTTTGGGACGAGACTCTATGCAACAGTTGATTTAGACAAGGCACGGGTTGGGCGAACCAGAATGGTACGCAAGGATGTCTCCAACCCCAAGTGGAACGAAAGCTTTCACATTTACTGTGCCCATCGCATCTCACACATTATATTCACTGTCAAATATGATAATCCCATTGGAGCAACTCTGATAGGCAGAGCTTACGTACCTGTTGAGCAAGTCATCAAGGGCACAGTTGCAAGATGGTTTGAGATACTAGATGAAGATGGTCGTCCGATACTTGGTGGCTCTAAAATCTTTATTAACATAAGCTTCGTCAATGTCACCAATGATAACTTCTGTCTCTGGTCTCAAGGAATAAAACCTCCACAGTTTGCAGTAGTTCATCGCACATTTTTTAATCACAGGAGTGGCTGCAAAGTTACTTTATACCAAGATGCTCATCTCACAAATGATTTCCTCCCTTATTTTCCACTCTCTGGAGGAAAATACTATACGCCTAGTAGGTGCTGGGAGGACATTTTCACTGCCATTATGAATGCTAAGCATTTCATTTACATAACTGGCTGGTCTGTTTACACTAAAATAACCTTAACTAGGGACAAAGGGAGGCCAATCCATAATGAAAACATCACCCTTGGGGAGCTGCTCAAGATGAAAGCTGATCAAGGAGTGAACGTTCTTATGCTTGTTTGGGATGACAGAACTTCTGTTTTGGAACTGAAGAAAGATGGATTAATGGAAACCCATGATGAGGAAACTGCAGATTACTTTAGAAACACGAAAGTCCATTGTGTTCTGTGTCCCCGTAATCCTGATGACGGAAAAAGCATCGTTCAAGGCGTTCAAATTTCAACAATGTTTACTCACCACCAGAAGACACTAGTCGTTGACAGTGAAGTACCTGATGAAGAATCCCACAAGCGGAGAGTCATAAGTTTTATTGGTGGTATTGATCTCTGTGATGGAAGATATGATACACAAGAACATCCTTTGTTTGCAACTTTGGGCACAACCCACCATGATGATTTCCATCAGCCAAACTTTGTAGGTGCTTCAATCGAGAAAGGTGGTCCAAGGGAACCGTGGCATGATGTTCACTGTCAACTTGAAGGAGCAGTGGCTTGGGATGTCTTATACAATTTTGAGCAGAGGTGGGAGAAGCAAGCTGAAAAGCAATACCTATTCTCACTTAGCGAGTTTGACGAAATCCTGGTCCCTCCATCTGATGTAACAACATCAGAAGATAAAGAGACCTGGACTGTTCAGTTATTTAGATCCATTGATGGTGGTGCGGTTTCTGGATTCCCTCAATCGCCAGAGGAAGCTGCTGAATTTGGCCTTGTTAGTGGGAAAGATAACGTCATTGACAGAAGTATTCAGGATGCATACATAAATGCTATTCGACGCGCAAAAAATTTCATCTACATTGAAAATCAATACTTTCTAGGGAGTTCATATGGCTGGCATGCATCTGACATCAAGGTTGAGGATATTGGAGCTTTGCACCTTATACCAAAGGAGCTGTCATTGAAGATTGTTAGTAAAATTGATGCGGGGGAGAGATTTTCTGTCTACATTGTAATCCCAATGTGGCCAGAAGGCATGCCTGAAAGTGCTTCGGTTCAAGCAATATTAGATTGGCAAAAGAGGACCATGGAGATGATGTATGTGGACATTGCAGAAGCCATTAAAAGGAAAGGAATTAATGCCCACCCGAGGGATTATTTGACATTCTTCTGCCTTGGAAACAGGGAGGGTAAGAAAGATGGAGAATATGCTCCCTCTGAGAAAGCAGAGCCTGACAGTGATTATAGTAGAGCACAAAATTCTAGGCGCTTCATGATCTACGTTCATGCTAAGATGATGATAGTGGACGATGAATACATAATCATTGGTTCTGCCAACATTAACCAGAGATCAATGGATGGTTCAAGGGACACTGAGATTGCAATGGGTGCATTCCAACCACACCATCTGACAGATAATGGAGTAGCCAGAGGTCAGATTTATGGGTTTCGACGAGCGTTATGGTTTGAGCATTTTGGGAATCCTAAGGAAGAAGTCTTGCAGTATCCAGAAAGTGTTGAATGCATCCAACTTGTGAATAATCTTGCTGAGTCAAACTGGGAAATATACTCGAAGGAAACATTTGATGAAGGTAGACCATTTCACCATCTCTTGCGTTACCCAGTAGAAGTAAACAATGATGGATCCATAACAACACTGCCAGGGTTTGAATATTTTCCTGACACCAAAGCTCGTATTCTGGGCTACAAATCTGATTATCTTAGAGCTCCTATTCTGGGCTACAAATCTGATTATCTTCCCCCTATCCTCACCACCTAG 2433 0.4221 MLQLLHGMLEVTIFEVDKLHIGCNFDFCRKIFGTRLYATVDLDKARVGRTRMVRKDVSNPKWNESFHIYCAHRISHIIFTVKYDNPIGATLIGRAYVPVEQVIKGTVARWFEILDEDGRPILGGSKIFINISFVNVTNDNFCLWSQGIKPPQFAVVHRTFFNHRSGCKVTLYQDAHLTNDFLPYFPLSGGKYYTPSRCWEDIFTAIMNAKHFIYITGWSVYTKITLTRDKGRPIHNENITLGELLKMKADQGVNVLMLVWDDRTSVLELKKDGLMETHDEETADYFRNTKVHCVLCPRNPDDGKSIVQGVQISTMFTHHQKTLVVDSEVPDEESHKRRVISFIGGIDLCDGRYDTQEHPLFATLGTTHHDDFHQPNFVGASIEKGGPREPWHDVHCQLEGAVAWDVLYNFEQRWEKQAEKQYLFSLSEFDEILVPPSDVTTSEDKETWTVQLFRSIDGGAVSGFPQSPEEAAEFGLVSGKDNVIDRSIQDAYINAIRRAKNFIYIENQYFLGSSYGWHASDIKVEDIGALHLIPKELSLKIVSKIDAGERFSVYIVIPMWPEGMPESASVQAILDWQKRTMEMMYVDIAEAIKRKGINAHPRDYLTFFCLGNREGKKDGEYAPSEKAEPDSDYSRAQNSRRFMIYVHAKMMIVDDEYIIIGSANINQRSMDGSRDTEIAMGAFQPHHLTDNGVARGQIYGFRRALWFEHFGNPKEEVLQYPESVECIQLVNNLAESNWEIYSKETFDEGRPFHHLLRYPVEVNNDGSITTLPGFEYFPDTKARILGYKSDYLRAPILGYKSDYLPPILTT 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01954 810 Pfam C2 domain 8 111 IPR000008 -
Bach3g01954 810 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 135 IPR035892 -
Bach3g01954 810 ProSiteProfiles C2 domain profile. 1 111 IPR000008 -
Bach3g01954 810 SMART pld_4 642 669 IPR001736 GO:0003824
Bach3g01954 810 SMART pld_4 314 352 IPR001736 GO:0003824
Bach3g01954 810 Gene3D Endonuclease Chain A 461 686 - -
Bach3g01954 810 PANTHER PHOSPHOLIPASE D 3 786 IPR015679 -
Bach3g01954 810 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 314 352 IPR001736 GO:0003824
Bach3g01954 810 FunFam Phospholipase D 455 688 - -
Bach3g01954 810 Pfam Phospholipase D Active site motif 314 352 IPR001736 GO:0003824
Bach3g01954 810 Pfam Phospholipase D Active site motif 643 669 IPR001736 GO:0003824
Bach3g01954 810 SMART C2_3c 8 111 IPR000008 -
Bach3g01954 810 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 642 669 IPR001736 GO:0003824
Bach3g01954 810 Gene3D Endonuclease Chain A 188 437 - -
Bach3g01954 810 SUPERFAMILY Phospholipase D/nuclease 488 723 - -
Bach3g01954 810 SUPERFAMILY Phospholipase D/nuclease 147 421 - -
Bach3g01954 810 Pfam Phospholipase D C terminal 715 787 IPR024632 -
Bach3g01954 810 PIRSF PLD_plant 1 797 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Bach3g01954 810 Gene3D C2 domain 2 133 IPR035892 -
Bach3g01954 810 FunFam Phospholipase D delta 189 432 - -
Bach3g01954 810 CDD C2_plant_PLD 4 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01954 Bach-Chr3 27428745 27432052 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01954 4 810 Phospholipase D Gene Family (Wang group) AT1G52570 64.842 0.0 1096
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01954 K01115 - gmx:100791688 1172.92