Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01953 ATGGTACAAGCAAAGAAGTTCAGAGGAGTCAGGCAGCGCCAGTGGGGCTCCTGGGTGTCAGAAATCCGCCATCCATTACTGAAGAGAAGGATATGGCTGGGGACATTTGAGACAGCAGAGGCTGCAGCAAGGGCATATGACCAAGCTGCCATTTTGATGAATGGTCAAAATGCAAAGACTAATTTCCCTCCTGCATCAAAGGATCAACCTGATCAGGTTGATGCCACTCCTTGTGATGACACTTTCTTATCTCCCAAGGCTCTATCAGAGCTCCTGAGTTCAAAGCTCCGGAAGCGTTGCAAAGACCCATCTCCATCCCTCACTTGTCTGAGGCTAGATGCTGACAATTCTCATATTGGAGTGTGGCAAAAGGGAGCTGGACCACGCTCTGACTCCAATTGGGTCATGAGGGTGGAGCTTGGCAAGAAACAAGCACAAGAAATGGAGGGTAAGTCAACTTTGTCACAAGGCTCACCAGACATCGGTGGCGATGTTGAAGCTGAAAACTTTAAAGGGGTGGATGAAGAAGACAAAGTTGCAATGCAGATGATTGAAGAGCTACTTAACTGGAACTATCCCTGTGTTTCAAGTAATCCTCAGGAAGAAAAAGGAACGCTTCCTTGTTAA 627 0.4737 MVQAKKFRGVRQRQWGSWVSEIRHPLLKRRIWLGTFETAEAAARAYDQAAILMNGQNAKTNFPPASKDQPDQVDATPCDDTFLSPKALSELLSSKLRKRCKDPSPSLTCLRLDADNSHIGVWQKGAGPRSDSNWVMRVELGKKQAQEMEGKSTLSQGSPDIGGDVEAENFKGVDEEDKVAMQMIEELLNWNYPCVSSNPQEEKGTLPC 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01953 208 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 4 151 - -
Bach3g01953 208 CDD AP2 5 65 IPR001471 GO:0003700|GO:0006355
Bach3g01953 208 FunFam Ethylene-responsive transcription factor 2 5 64 - -
Bach3g01953 208 Pfam AP2 domain 6 55 IPR001471 GO:0003700|GO:0006355
Bach3g01953 208 SUPERFAMILY DNA-binding domain 6 63 IPR016177 GO:0003677
Bach3g01953 208 ProSiteProfiles AP2/ERF domain profile. 6 63 IPR001471 GO:0003700|GO:0006355
Bach3g01953 208 MobiDBLite consensus disorder prediction 144 166 - -
Bach3g01953 208 Gene3D AP2/ERF domain 5 64 IPR036955 GO:0003700|GO:0006355
Bach3g01953 208 SMART rav1_2 6 69 IPR001471 GO:0003700|GO:0006355
Bach3g01953 208 PRINTS Ethylene responsive element binding protein signature 29 45 IPR001471 GO:0003700|GO:0006355
Bach3g01953 208 PRINTS Ethylene responsive element binding protein signature 7 18 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01953 Bach-Chr3 27426077 27426932 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01953 1 200 AP2-EREBP Transcription Factor Family AT5G25390 59.314 1.06e-78 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bach3g01953 AP2 3.1e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01953 - - lang:109326202 272.322