Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01911 ATGGATAAAGAAAACAAAATTTGTGCCAAAGATGAAGAGCGTCCAGTCCGAATGACTCGAGCAAAGGCTAGGGCACTGGGATCCATTGGGGAAATCCCTCCCTCCTCAAGACCATCATTTAAACCAGAACCGAAGCGTGTCCTTCGAGCAAATTACAAAAAAGGAGCATCTGATGAGAATAAAACTTTTGTGGCTGCCCCTGCTGGTCTTCAGCATAAGAGGAAGGCAGTGCTTACAGATTTAACTAACATATGTGATATATCATATAATAAGACTATTAAAGCGTCACACCGTCAGGCAACAAGAGGTTACACGAGGAAAAACATGAAGCTAGCTGCAGATGTCTCCGGGGAAGTTCCGTCAATACAAGAGGATGTTAAAACAAAGTTAGCTGAAGAATTATCCAAAATACGGATGGTAGAATCATATGACACCACCGCTGCAGCAAGGTTGGCAGACAAAGAGCCACTACAAAAAAGTACATCCCGGATTAGAAAATGTGTTTTATCAGATCCCATGATTTCGATGCAGGACTCTAGAAAATCTGATGAGCTCCTGAGCCCTCCATATAAAGATATAGATATGATCTGTGAGAAACTACGAGCCTCAGATGGCCTGGGCATTGTGGACATTGATTCAGAGATAAAGGATCCTCAAGTTTGGAGTTTATATGCCGCTGATATATACAACAATAAACGTGTCACGGAGCTCGAAAGGAGACCATCATCCGATTACATGGAGTTGTTGCAGCAAGATATCACTCCAAGCATGCGTGGAATTCTTATTGATTGGCTCGTGGAGGTTTCTGAAGAATATAAGTTGGTTCCGGACACCCTTTACCTAACAGTAAATCTCATTGATCGGTTTCTATCTAAAGTTTTGATTCAGAAACAAAAGCTCCAGCTGCTTGGTGTTACTTGCATGCTGATTGCATCAAAATATGAAGAAATTTGTGCTCCTCGAGTGGAAGAATTTTGTTTCATCACAGACAGTACTTACACGAGAGGGGAGGTACTGAAAATGGAGAGTGAAGTTTTAAATATCCTGCATTTTCAATTATCTGTTCCAACCAGCAAAACATATCTCAGGTACTTAATCTTTTGTTGGAAAGTTCATTGTGTTGAACTGGAATACCTAGCAAATTATTTAGCAGAGCTTACTCTTGTCGAATACAGCTTCCTGAAGTTCCTACCTTCCCTGATTGCTGCATCTGCTATTTTCCTTGCCAGATGGACACTCAACCAGTCAGACCACCCATGGAACCCAACTTTGCAGCACTACACAAATTACCGAGTGTCCGAACTTAAAACTACAGTTCTTGCACTGGAAGATCTGCAGCTTAATACCAAAGGTTGTTCCCTTAATGCCATACGCGAAAAGTATAAACAACAGAAGTTCAAGTGTGTGGCAGCATTGTCTCCAAAATCGGTGTTATCACTCTTCTAG 1446 0.4156 MDKENKICAKDEERPVRMTRAKARALGSIGEIPPSSRPSFKPEPKRVLRANYKKGASDENKTFVAAPAGLQHKRKAVLTDLTNICDISYNKTIKASHRQATRGYTRKNMKLAADVSGEVPSIQEDVKTKLAEELSKIRMVESYDTTAAARLADKEPLQKSTSRIRKCVLSDPMISMQDSRKSDELLSPPYKDIDMICEKLRASDGLGIVDIDSEIKDPQVWSLYAADIYNNKRVTELERRPSSDYMELLQQDITPSMRGILIDWLVEVSEEYKLVPDTLYLTVNLIDRFLSKVLIQKQKLQLLGVTCMLIASKYEEICAPRVEEFCFITDSTYTRGEVLKMESEVLNILHFQLSVPTSKTYLRYLIFCWKVHCVELEYLANYLAELTLVEYSFLKFLPSLIAASAIFLARWTLNQSDHPWNPTLQHYTNYRVSELKTTVLALEDLQLNTKGCSLNAIREKYKQQKFKCVAALSPKSVLSLF 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01911 481 PIRSF Cyclin_A_B_D_E 34 480 IPR046965 GO:0016538|GO:0044772
Bach3g01911 481 Pfam Cyclin, N-terminal domain 227 354 IPR006671 -
Bach3g01911 481 PANTHER CYCLINS 183 468 IPR039361 -
Bach3g01911 481 Pfam Cyclin, C-terminal domain 356 474 IPR004367 -
Bach3g01911 481 FunFam Cyclin A1 343 471 - -
Bach3g01911 481 SMART cyclin_7 360 444 IPR013763 -
Bach3g01911 481 SMART cyclin_7 263 347 IPR013763 -
Bach3g01911 481 SUPERFAMILY Cyclin-like 216 353 IPR036915 -
Bach3g01911 481 ProSitePatterns Cyclins signature. 258 289 IPR006671 -
Bach3g01911 481 Gene3D - 227 471 - -
Bach3g01911 481 SMART Cyclin_C_2 356 475 IPR004367 -
Bach3g01911 481 SUPERFAMILY Cyclin-like 355 475 IPR036915 -
Bach3g01911 481 CDD CYCLIN_AtCycA-like_rpt2 356 466 - -
Bach3g01911 481 Gene3D - 241 354 - -
Bach3g01911 481 FunFam Mitotic cyclin 6 241 341 - -
Bach3g01911 481 CDD CYCLIN_AtCycA_like_rpt1 217 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01911 Bach-Chr3 27185096 27189299 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01911 3 481 Core Cell Cycle Gene Families AT5G25380 54.620 8.66e-158 453
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01911 K06627 - gmx:547780 605.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach3g01911 3 27185096 27189299 Bach12g00534 12 3625572 3629423 BWGD