Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01909 GTCTGACGCCATCTCCTCGTTACCTCCGTCACTCCAAGGTCCAAAAAAACTCCAGACAAAGGAAAGATAAACTCAATCTATACGGCGCCGTTTACAACTTTTCTGTCGTCTCACCAAGCCTTCCCCTGACCACAATCTTGCTCGTTCTCTCTGAACTGCAGCTGATGTAGGATATTTATGAAGTTTATTGGTGGTCTCTCATGAACAAAGGGCAGAATGGAATTTGCTAATTTTGCCGCATCCCATGATGTCGAGTAGTTCAATTTAATAGTACAAGTTGACATTCCTGGGTGACAGAAGCAGGATTTGTTTTGACAAAGCTAAGAATTTGTATTTAAAGGTGGTATACATTTTTTCTGCATCTCTATGCTTCATTGGTGGTCACTTGTGTTGGTGGACTTGGATGGATGTTCTCTCACCAGAACTATATCCTGAAGGTCTAGCCGACACTTACCCATTATTGATGGAGCAGCCAGGGCACTTGAACGGCAGTCAGCAGACTCAGCACATTATTGACATAACCGGGAGTACTGATGCTTCCACATCTCCCTCTCCTGATGATAGACATTTTAATGGCACAGATACATCACAGCATGAAGGTGGACCCAATGGTTCAAGATTACCTGTTTCTCAACCTTCAGTTCCCCCTGCTAATGTATCTAATGGATCAAATTCTAGGAATTCTTCACTAGTCAGACGTGGGGATACCCGGCGACACAGGAGTCCATTGAATTCTGGGTTATGGGTGTCTGTTGAACTAGTCCTCACAGTGAGCCAGATTGTTGCATCTATTACTGTTTTGTCTTTGTCAAAGCATGAGCATCCACAGACTCCATTGTTTGCATGGATTGTGGGTTATGCAATTGGATGTGTTGCTACCCTCCCTTTGCTTTATTGCCGTTATTATCATCATCGCCAGATTCAAGAGCAAGATTCATCTCAACGGCATCAAACTTCTCCTCGAATTGATGGTCCTTCAGGGCCCTTTTCTCTTTCCCTTCCTAGAACTAATGAAGGAGAGGATAATCAGGCTGCAGTGGCTTCCAGAAGCAATCAAGGGTCATGGTTGATGAATCCCCGCAGATTGAAGACACTAATGGAATACTTCAAAATGGCCTTGGATTGCTTTTTTGCGGTATGGTTTGTTGTTGGCAATGTGTGGATCTTTGGAGGACGTGCATCAGCTGATGAGGCTCCTAACTTGTACAGGTTATGTATAGTGTTTCTTACCTTTAGCTGTATTGGTTATGCTATGCCCTTCATTCTATGTGCAACAATATGCTGTTGTCTGCCTTGTATAATCTCCATACTTGGGTTTAGAGAGGATCTGACGAACACCAGAGGGGCAACCCCTGAGTCCATTAATGCTCTGCCAACTTACAAGTTCAAAATGAAGAAACATAAAAACAGTGATGAAAGCAACTCGGCTGCTGGTGAAGGTGGAGTTGTGGCTGCAGGAACTGAAAAGGAGCGTGTGATCTCTGGAGAAGATGCGGTTTGCTGTATCTGCCTGGCAAAGTATGAAAATAATGACGAGCTGAGAGAGTTGCCCTGTTCTCATCTGTTTCACAAAGACTGTGTAGACAAGTGGTTGAAGATAAATGCGTTATGCCCTCTTTGCAAGAAGGAAGTTGATCAGAACGTAACAGGATCGGTCTCTAGGGATAGTGGCGGCTAA 1678 0.441 MDVLSPELYPEGLADTYPLLMEQPGHLNGSQQTQHIIDITGSTDASTSPSPDDRHFNGTDTSQHEGGPNGSRLPVSQPSVPPANVSNGSNSRNSSLVRRGDTRRHRSPLNSGLWVSVELVLTVSQIVASITVLSLSKHEHPQTPLFAWIVGYAIGCVATLPLLYCRYYHHRQIQEQDSSQRHQTSPRIDGPSGPFSLSLPRTNEGEDNQAAVASRSNQGSWLMNPRLKTLMEYFKMALDCFFAVWFVVGNVWIFGGRASADEAPNLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISILGFREDLTNTRGATPESINALPTYKFKMKKHKNSDESNSAAGEGGVVAAGTEKERVISGEDAVCCICLAKYENNDELRELPCSHLFHKDCVDKWLKINALCPLCKKEVDQNVTGSVSRDSGG 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01909 423 FunFam E3 ubiquitin-protein ligase 348 414 - -
Bach3g01909 423 SUPERFAMILY RING/U-box 357 412 - -
Bach3g01909 423 MobiDBLite consensus disorder prediction 41 108 - -
Bach3g01909 423 CDD RING-H2_EL5-like 365 405 - -
Bach3g01909 423 MobiDBLite consensus disorder prediction 41 96 - -
Bach3g01909 423 MobiDBLite consensus disorder prediction 178 195 - -
Bach3g01909 423 ProSiteProfiles Zinc finger RING-type profile. 365 406 IPR001841 -
Bach3g01909 423 MobiDBLite consensus disorder prediction 175 195 - -
Bach3g01909 423 Pfam Ring finger domain 365 406 IPR001841 -
Bach3g01909 423 SMART ring_2 365 405 IPR001841 -
Bach3g01909 423 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 347 415 IPR013083 -
Bach3g01909 423 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 26 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01909 Bach-Chr3 27173616 27178270 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01909 13 416 C3H Transcription Factor Family AT1G80400 51.202 1.21e-142 411
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01909 - - qsa:O6P43_015633 602.438