Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01902 TTTCAATTTATCCTTGAGCTATATTCCAAGGCATTCCAACTCGAAGTTGTTGTTGCATCAATGGCAGTTTCAGATTAGATCTAGGGTTTTTCTTTCGTCGTTATCTATCGGCCCTGGTTGGGGTGGAATCGATTTTCCGGTGCTAGGATTGGGGATCTCGCATTTTGGAGGTAATTGATCCCTGTGCTGGTTACCACGATTTTCTGGATTTGAAAGGTGGGCTAGGAAAATGTATGTCAAATCGGCGCAATCATCATTTCGTGACCGAACACTGGAATTCCAGAGCATAGCGGAGAGGCTAAAGAAATCCGTCTCGTCAGGACCAGGGTCAAATGGACCAAGTAGTAGTTCGAGATCGGAGGAGCAGCGATCCGCTGTTGCAATTCAGTCAGAGTTTAATAGGAGGGCTTCCAAGATTGGATATGGGATACACCAGACGTCGCAGAAGCTTGCCAAGCTGGCTAAGTTGGCAAAAAGGACTTCGGTTTTTGATGACCCCACCATGGAAATCCAAGAGCTTACAGCAGTGATTAAGCAAGATATTACTGCACTCAATTCTGTTGTCGTGGATCTTCAGCTACTCTGCAACTCTAGAAATGAGAGTGGGAATATTTCTAGCGACACAACAAGTCATTCAACCACAGTTGTGGATGATCTAAAAAACCGATTAATGAGTACCACAAAAGAGTTTAAAGAAGTTCTCACCACGCGAACAGAGAATTTGAAAGTCCATGAGAACAGAAGACAGTTGTTTTCGTCCTCTGCTTCCAAGGACTCTGCAAATCCTTTTGTTCGTCAACGTCCATTGGCTTCAAGAGCAGCTGCCAGTACTTCTAATGCCCCTGCTCCTCCATGGGCTAGTGGATCACCATCTTCATCTCAGTTATTTCCCAAGAAACAGGTAGATGGGGAGAGCCAGCCGTTGCTGCAACAGCACCATCAACAACAGCAGCAGCAAATGGTTCCGATGCAAGACAGTTACATGCAAAGTAGAGCTGAAGCTCTTCAGAATGTTGAGTCGACCATTCATGAATTGAGCAACATCTTTAACCAATTGGCAACACTCGTTTCTCAACAAGGAGAGATTGCTATCAGGATTGATGAGAACATGGATGATACATTGGCGAATGTAGAAGGTGCCCAGGGGGCTTTGTTGAAGTATCTGAACAGCATATCTTCTAATAGTTATTCCAAAGTCAGAATTGAAAAGGAAGACAAAAGTAACGGCCTTCTGACTGCTGATTAG 1246 0.4446 MYVKSAQSSFRDRTLEFQSIAERLKKSVSSGPGSNGPSSSSRSEEQRSAVAIQSEFNRRASKIGYGIHQTSQKLAKLAKLAKRTSVFDDPTMEIQELTAVIKQDITALNSVVVDLQLLCNSRNESGNISSDTTSHSTTVVDDLKNRLMSTTKEFKEVLTTRTENLKVHENRRQLFSSSASKDSANPFVRQRPLASRAAASTSNAPAPPWASGSPSSSQLFPKKQVDGESQPLLQQHHQQQQQQMVPMQDSYMQSRAEALQNVESTIHELSNIFNQLATLVSQQGEIAIRIDENMDDTLANVEGAQGALLKYLNSISSNSYSKVRIEKEDKSNGLLTAD 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01902 338 MobiDBLite consensus disorder prediction 26 49 - -
Bach3g01902 338 Pfam Syntaxin-5 N-terminal, Sly1p-binding domain 7 26 IPR021538 -
Bach3g01902 338 ProSitePatterns Syntaxin / epimorphin family signature. 255 294 IPR006012 GO:0005484|GO:0006886|GO:0016020
Bach3g01902 338 CDD SNARE_syntaxin5 252 318 - -
Bach3g01902 338 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 249 311 IPR000727 -
Bach3g01902 338 SMART tSNARE_6 244 311 IPR000727 -
Bach3g01902 338 MobiDBLite consensus disorder prediction 172 250 - -
Bach3g01902 338 PANTHER SYNTAXIN 52 318 IPR045242 -
Bach3g01902 338 Gene3D - 51 304 - -
Bach3g01902 338 MobiDBLite consensus disorder prediction 195 250 - -
Bach3g01902 338 Pfam SNARE domain 285 320 IPR000727 -
Bach3g01902 338 SUPERFAMILY t-snare proteins 54 304 IPR010989 GO:0016020|GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01902 Bach-Chr3 27131119 27134629 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01902 1 325 SNARE and Associated Proteins AT3G24350 63.401 1.45e-131 378
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01902 K08490 - gmx:100811494 470.7