Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01900 TTACTGTAGTTGAGAGGAATTTTTCCATGATCTTATTTTATTGCTAGGCCTTTGGTGCTTAGTAATTTGAAGCCAGGGCTGCGTATTCAAAAATTAAGAAGATAATAATTGAGCACCTTTTTCCTAGTTACATGGAAGAGTGAGGTGTCATGTTAATAGTTGTTCTCCATTTGGATCTGTTGATAGGAGGCTTTAGGCAGATGAGTAACTATGTAGGTTTAGGTAGTTTCTACGTGGAAATGTTTTGCAGGAGCAGGTAACTGGGATCTGCAGTAGACCAAGCAATTGCAGAAATTGAACACCGCAAAGACACGGTTTCTGAAGGCATGACTGGTCGAAAAGTGCATCTTTTTAGCCTCACCCATGTCAGACCTCCACCTTAATAACATTTACTTTGACTACCATACCTTTTCAGCATCTGTAGACAATTTGGAACCCATTTGCCGCAGACTACTTTGAAGGGGTTACCTTTAGTATATAATTTATGGAAAAAAAATTTCACTTTCCCTTTGTCCCTTCTTAGACGGTGAAATGATCTGCTTGATGCTGCACCTGTTACTCAACCTCTTGATATTCTTATCAGTAGGCCTTTATTTGCGATCATCTTCTGGCCTTCAATTTTGTCTTGACTTGGTCAAGTTGCACCTGCTGTTAGAAGGGAAAAAACCTACTGCACTGCTATTTTCGGTAAAGACTGTATTCTTGGATATGGATAGTCTAGTCCCTGAAGTGGTATAATGTTCTTTCTAGAAATGAAGCCATGACATCGTTTCATATTCCACTGTCAAGCAACCTAGATATTGAAGGAAAATGTGCTAACTTAATGAAAAAGAATCTACCTAAGGTTCAGATGGTATGAAGTTTTAGTATTTGATTTGGGTAAGTTTCAGTTCCTGGAGGAGTCAGTGCGGAACTGCCAATTGAGGTTGGAGCGTCAGTTGGGTGGCTCCAGTAATTGGATTTGGTTCTTGAAGTTCTTCAAGGAATCAAGTGATCATTTCGTGGTATTGATTTCTGTTTACTGATGGAAGCTGTCAAGGACCCCTGGGCTATCTTGTAGTTTTGTGTGGGATTATTGTGTATGCGCATGTTTTCATGTGTTCTCTTGGAGTAATGCTGATTGGAGCTGTCCAACCTTAATTCGATTTTGCTGTTGCTGATTTCAATTGGTCTGCACTCTGCAGCAGTATAGAAGAAAGCAACAGTGCCTTCGGTGTTTGTCTGACTTGATGGGGTTATTGAATATGCCTTTAGAAGCCTTAGGATTATTTCTAAATATGTTCCTACATGCAGGTCCCTAGGCCTATTTCCAGCTTCTAGATAGTTAACCTTATCCAAAGTACCATGGGAGAGGTGGCAGTAATGCACTCTGAGTCTCTGCATTTTGAGTGCAAGGATATGAAGCATATGACAGAGAAAAACGTGTATTTTCACGAATCCAATGCAGAGTGCATGCCTGGAGAAGAAGCCAGAGATCATGAAGACATCAGTGACATACAGGATAAAGGATATATGCAATATGGATGTTTTCATTATCGAAGGAGATGCCGAATCAGGGCCCCTTGTTGCAATGAGATTTTTGATTGCCATCATTGTCACAATGAGATTAAAAATAACATTGCCATTGACCAGAAGCATAGACATGACATTCCCCGCCATCAAGTTAAACAGGTGATTTGTTCACTTTGTGGGACTGAACAAGAGGTCCAGCAAAATTGTATTAACTGTGGTGTTTGTATGGGCAAATACTTTTGTGAGACCTGCAAGCTCTTTGACGATAACATATCTAAGCGGCAGTATCATTGCAGTGGATGTGGGATTTGCAGAATTGGGGGAGGAGAGAATTTCTTCCATTGCTATAAGTGTGGCTGTTGCTACCCGATTTTGCTGAAAAATAGTCACCCTTGTGTGGAAGGAGCTATGCATCATGATTGCCCTATTTGTTTTGAGTATTTGTTCGAATCAAGGAATGACGTCACTGTTATGCCCTGTGGGCATACAATCCATAAGAGCTGCCTGAGGGAAATGAAAGAACACTTTCAGTATGCATGCCCCCTCTGCTCAAAATCAGTTTTTGATATGTCAAAGGTGTGGGAGAAATTTGACATGGAGATTGCCGCCATCCCAATGCCTGAACCATATCAAAATAAAATGGTTTGGATCCTCTGCAACGACTGCGGAAAAACTTCTTACGTTCAGTTCCATGTTGTGGCTCAAAAATGTTCCAACTGCAAATCCTACAACACAAGAAAAACAGGAGGCTGAGCCGGTGGCAATGGTGTTATTGTTTCCACAAAGGCTGCATTTGGTTTCGCTTGATTCTTGTGAAGGTGGTGGCAAATTCAGTTGTGTCCTTCGTTGCGTACGAGGAAGTCACACAAGTGGGAAGCTTGACTATCCTCAGGAATGTTGACTACACGCTCAGCCACTTCAAGGCAAAACCATTGTTGGTGTCGGGGATAGTTTTTGAGTCATCGAGCGTTATTTGTCGGGTTGGATTAGTAGCTTGAAGCTCTAAAACGCTCTTGCAGTTTTCTA 2538 0.4137 MHSESLHFECKDMKHMTEKNVYFHESNAECMPGEEARDHEDISDIQDKGYMQYGCFHYRRRCRIRAPCCNEIFDCHHCHNEIKNNIAIDQKHRHDIPRHQVKQVICSLCGTEQEVQQNCINCGVCMGKYFCETCKLFDDNISKRQYHCSGCGICRIGGGENFFHCYKCGCCYPILLKNSHPCVEGAMHHDCPICFEYLFESRNDVTVMPCGHTIHKSCLREMKEHFQYACPLCSKSVFDMSKVWEKFDMEIAAIPMPEPYQNKMVWILCNDCGKTSYVQFHVVAQKCSNCKSYNTRKTGG 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01900 300 Pfam Ring finger domain 190 233 IPR001841 -
Bach3g01900 300 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 186 252 IPR013083 -
Bach3g01900 300 SUPERFAMILY RING/U-box 190 240 - -
Bach3g01900 300 ProSiteProfiles Zinc finger CTCHY-type profile. 126 190 IPR017921 -
Bach3g01900 300 ProSiteProfiles Zinc finger CHY-type profile. 48 124 IPR008913 GO:0008270
Bach3g01900 300 SUPERFAMILY CHY zinc finger-like 52 126 IPR037274 GO:0008270
Bach3g01900 300 SUPERFAMILY Zinc hairpin stack 127 184 IPR037275 -
Bach3g01900 300 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 28 298 - -
Bach3g01900 300 Gene3D - 262 300 - -
Bach3g01900 300 Pfam CHY zinc finger 55 136 IPR008913 GO:0008270
Bach3g01900 300 SMART ring_2 191 233 IPR001841 -
Bach3g01900 300 CDD RING-H2_Pirh2-like 190 234 - -
Bach3g01900 300 Pfam Zinc-ribbon 238 296 IPR039512 -
Bach3g01900 300 ProSiteProfiles Zinc finger RING-type profile. 191 234 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01900 Bach-Chr3 27102048 27106777 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01900 53 296 C2H2 Transcription Factor Family AT3G18290 40.000 6.40e-53 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01900 K10144 - gmx:100803569 556.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach3g01900 3 27102048 27106777 Bach12g00543 12 3697372 3703138 BWGD