Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01885 ATGTTTTCCAGCAGCCAGTTTGATGCCAACTCCGCCTTCTCCGGCGGCGGTTTCATGTCCTCTCAGGCAACCCAGTCTAACGATTCATCCCCATCTCCAGCAAAAGGCCAGGGAACTCAGGGCTTGGTTCCAGTAACAGTGAAACAGATAAGCGAAGCCACTCATTCCGGTGATGAAAAGTCGAACTTCATAATCAACGGTGTTGATGTGACCAATGTCACCTTGGTAGGTATGGTGTTTGCGAAAGCTGTAAGAAACACGGATGTTCGTTTCATTCTAGACGATGGAACAGGACGAATCAAATGTCGAAGATGGGTGAACGAGACTTTTGATTCAAATGAAATGGAGGAAATACAAGATGGTATCTACGTTCGTGTTTATGGGCATTTAAAAAGCTTTGAAGGTGTAAGACAATTAGTTGCCTTCTCTGTCAGGCGTGTAACAAATTTTGATGAGATTGCTTTTCACTTTATTGATTGCATACATAACAACCTCCAATCCAGATTAAAGGTGGAAGGAATCACTCCCCCTCATCTCGGGTCATCAGACTCATCCTTGAATACTCCGGTGAAAAATGTATCAAATGGATATCAGCCACCATCATCAAATCCTTTATATGCACAATATAGCATGGATGGAATCAAGGATTGTGATAAACTGGTTCTGGATTATCTACAGCAACATTCAGATATGTCAGATGAAAGGGGAATACATGTTGATGAACTGTCTCGAGGGCTTAAACTTCCATTGGACAAGATCATGTTGTCTCTGAAGACTCTTGGAGATGATGGTTTGGTATACTCCACCATCGATGATTTCCACTACAAGCAAGCTTAA 837 0.4241 MFSSSQFDANSAFSGGGFMSSQATQSNDSSPSPAKGQGTQGLVPVTVKQISEATHSGDEKSNFIINGVDVTNVTLVGMVFAKAVRNTDVRFILDDGTGRIKCRRWVNETFDSNEMEEIQDGIYVRVYGHLKSFEGVRQLVAFSVRRVTNFDEIAFHFIDCIHNNLQSRLKVEGITPPHLGSSDSSLNTPVKNVSNGYQPPSSNPLYAQYSMDGIKDCDKLVLDYLQQHSDMSDERGIHVDELSRGLKLPLDKIMLSLKTLGDDGLVYSTIDDFHYKQA 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01885 278 Gene3D - 38 168 IPR012340 -
Bach3g01885 278 PANTHER REPLICATION PROTEIN A-RELATED 6 276 IPR040260 -
Bach3g01885 278 MobiDBLite consensus disorder prediction 18 40 - -
Bach3g01885 278 Pfam OB-fold nucleic acid binding domain 73 144 IPR004365 GO:0003676
Bach3g01885 278 SUPERFAMILY "Winged helix" DNA-binding domain 212 276 IPR036390 -
Bach3g01885 278 Gene3D - 208 278 IPR036388 -
Bach3g01885 278 PIRSF RPA32 1 278 IPR014646 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Bach3g01885 278 FunFam Replication protein A 32 kDa subunit 209 278 - -
Bach3g01885 278 SUPERFAMILY Nucleic acid-binding proteins 42 165 IPR012340 -
Bach3g01885 278 CDD RPA2_DBD_D 72 162 - -
Bach3g01885 278 FunFam replication protein A 32 kDa subunit A-like 35 169 - -
Bach3g01885 278 Pfam Replication protein A C terminal 191 272 IPR014892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01885 Bach-Chr3 26960495 26963492 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01885 1 276 Core DNA Replication Machinery Family AT2G24490 49.823 2.22e-93 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01885 K10739 - qsa:O6P43_015598 434.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach3g01885 3 26960495 26963492 Bach3g01885 3 26960495 26963492 ECH