Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01875 ATGGAGGAATATTCTGGTAAAAGGGCCAATGATGGGGTGGTAGTCCCTAGAAAGGGGATGGCTCATGTGTTTAGAGATACTGCTAAGACTAGGGATCGGAATAGTCAATTGTGCAGCCGACTTGGTTGCAGTAGCAGAGTCAACACTCCTAAAGGTACTCAAAGTGGTTATTCTGAGAAAGGCAAATCTTTGAGGCCTTCAAGCAGACCCTCTTCAAATGGCAAGGAAGCGAGTGGAAGTTCCTCTAGAACTGTCTCAGGATCTAATAATGCAGGAAAATCCCTCGCTGAGCCTAGGAGAACGTTATCCTCTCGCTTAGAAACAGATTCATCTGAAACAAGCAGTGTACAGAATGAACCACAAGTTTCAGAGCTCATCCCTCCACCAGAAAAAATTGAGGGAGGGCTTCAAGCCGAACTGGAAAATACTGAATCCTGCAACATTATGCAGATGGAAGTAGGAAGCTCTAGTATAGTATCAAATACAAGATCTCGGAGGAACTTCCATCAAAAGCCTGGATTGCGTGGTCAAGAAGTTAAAAGCACTGGCCCAGTAACGAGTGGAGGTACCAGCAGATATGGGTTGAGGAACCTCCGATGCAACTCTATATCCGATGTCATCCCAGCTAGGTGCTCATCATCAGATTCAAGCCTCAATGGAAGAAAGGATATGATAAAAAAGAGATGCTGTGAAGGAGAAAGTAGTTCTACAGGTAGAGGGAAGAAGATCAGTGGGTCTCCCTTGGAAGGACGGAATTCTGGTTCCAGAAATGGCATATCAATATCTGATTCAAGAAGATCCAGAAATATTCCTGCTCACAGGGACACCAATATTGCATCAGTTAGAACTCGTAGATCAGTTAGTGGTCATGTCAGGGGAAGGCTTTCTAGCCTGGGAAATGAAAGCCCAGAATCATCAAATGAGTCCTCTATTGTCGTACCTCCTTTGCCTCATTCTGGTGAACTTACCCCTCCTGGTTTATCACTTCATACTTCTCCAGAGACTCCTTTAAGTCGTTCAAGCTCTTATAGTAGGTCGGATACTAGCGTTGAGCAGTTATGTGGAGTTATCCCGCCTTCTACTTTAGAATATGGCATCACTCGTTCATTAATAAACCGAGATGGCTTTCGACGCTTCAACATGGATGGTATTGCCGAGGTACTGTTGGCACTTGAGAGGATTGAACAAGATGAAGATCTAACACACGAGCAAATTCTTTTACTGGAGACCAACCTATTCCTTAATGGACTAAACTTCTATGATCAGCATAGAGACATGCGACTGGATATTGATAACATGTCATACGAGGATCTATTAGCTCTAGAAGAGAGCATGGGTAGTGTGAGCACAGCCTTAAATGAGGAAGAGCTGTCAGAATGCCTGAAGAAAAGTATTTACCAGTGTGCACTTTCAGACGATGCAGCTGAGAGTTGCAATGAGGATAAGGATGATACCAAATGCAGTATCTGCCAGGAGGAGTATGTGGTAGGACACGAAGTGGGGAGTTTGCAGTGCGAGCATAAGTATCATGTGGTTTGTATACAGCAGTGGCTGCGATTGAAGAATTGGTGTCCTATATGCAAAGCATCAGCAGCACCAACAAATTCATCTTCACCTTCTTGAATGCAATATTATATATACCAGATGGGGGAGAGTGATCTCTTTCCACTCTTTCTCTTCCTTTTTCTTTTTGTACAAAATCCAGTTACTCCTCACATTTTACTGGTCATATATATGTACATACACAATATTTTCATCCTGATATACTAATAATAACTCAAGCCATTGGCTTGATT 1796 0.4304 MEEYSGKRANDGVVVPRKGMAHVFRDTAKTRDRNSQLCSRLGCSSRVNTPKGTQSGYSEKGKSLRPSSRPSSNGKEASGSSSRTVSGSNNAGKSLAEPRRTLSSRLETDSSETSSVQNEPQVSELIPPPEKIEGGLQAELENTESCNIMQMEVGSSSIVSNTRSRRNFHQKPGLRGQEVKSTGPVTSGGTSRYGLRNLRCNSISDVIPARCSSSDSSLNGRKDMIKKRCCEGESSSTGRGKKISGSPLEGRNSGSRNGISISDSRRSRNIPAHRDTNIASVRTRRSVSGHVRGRLSSLGNESPESSNESSIVVPPLPHSGELTPPGLSLHTSPETPLSRSSSYSRSDTSVEQLCGVIPPSTLEYGITRSLINRDGFRRFNMDGIAEVLLALERIEQDEDLTHEQILLLETNLFLNGLNFYDQHRDMRLDIDNMSYEDLLALEESMGSVSTALNEEELSECLKKSIYQCALSDDAAESCNEDKDDTKCSICQEEYVVGHEVGSLQCEHKYHVVCIQQWLRLKNWCPICKASAAPTNSSSPS 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01875 540 MobiDBLite consensus disorder prediction 325 345 - -
Bach3g01875 540 MobiDBLite consensus disorder prediction 107 122 - -
Bach3g01875 540 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 69 532 IPR045191 GO:0061630
Bach3g01875 540 MobiDBLite consensus disorder prediction 34 97 - -
Bach3g01875 540 FunFam E3 ubiquitin-protein ligase arkadia 449 533 - -
Bach3g01875 540 SUPERFAMILY RING/U-box 481 531 - -
Bach3g01875 540 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 471 539 IPR013083 -
Bach3g01875 540 SMART ring_2 487 527 IPR001841 -
Bach3g01875 540 MobiDBLite consensus disorder prediction 237 266 - -
Bach3g01875 540 ProSiteProfiles Zinc finger RING-type profile. 487 528 IPR001841 -
Bach3g01875 540 MobiDBLite consensus disorder prediction 168 190 - -
Bach3g01875 540 Pfam Ring finger domain 486 528 IPR001841 -
Bach3g01875 540 MobiDBLite consensus disorder prediction 293 313 - -
Bach3g01875 540 MobiDBLite consensus disorder prediction 229 345 - -
Bach3g01875 540 MobiDBLite consensus disorder prediction 24 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01875 Bach-Chr3 26894881 26897357 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01875 366 534 C3H Transcription Factor Family AT2G15530 40.237 7.50e-33 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01875 - - gmx:100787213 687.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach3g01875 3 26894881 26897357 Bach12g00564 12 3855178 3859080 BWGD
Bach3g01875 3 26894881 26897357 Bach3g01875 3 26894881 26897357 ECH