Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01868 CTTTTTTATCCTTTGGTTCAGCAGCACATAACTTCAGGTTCTCGTCTGAAATACCAAAGCGATGTCTCGTGTATATGTTGGTAACTTGGATTCAAGAGTTACCGAGAGAGATCTTGAAGATGAATTCCGTCAATTCGGAGTTATACGGAGTGTTTGGGTTGCACGGAGACCACCAGGTTATGCTTTTATTGACTTTGATGACCGTAGAGATGCGGAGGATGCTATCCGTGACTTAGATGGCAAGAATGGTTGGAGGGTAGAGCTTTCTCACAACTCTAGAGGTGGAGGTGGTGGCCGGGGAGGTGGTCGTGGTCGCTCCGGTGGTTCTGATCTGAAATGTTACGAGTGTGGTGAGCCTGGTCATTTTGCTCGTGAATGTCGCATGCGCGGTGGTTCAGGGAGACGTCGTAGCCGCAGTCCACCTCGATTCCGCAGGAGCCCAAGTTATGGGCGAAGGAGTTACAGTCCTCGTGGGCGGTCTCCTAGGCGCCGCAGTTTGTCACCTCGTGGACGCAGCTATAGCAGGTCACCTCCTCCTTACCGTGGACGTGAGGAGCTACCATATTCAAATGGGAATGGACTTAGGGAGCGTCGCCGAAGCAGAAGTTAATTTATGAGATGGGAACTGGCATTGTTTAG 639 0.5086 MSRVYVGNLDSRVTERDLEDEFRQFGVIRSVWVARRPPGYAFIDFDDRRDAEDAIRDLDGKNGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRMRGGSGRRRSRSPPRFRRSPSYGRRSYSPRGRSPRRRSLSPRGRSYSRSPPPYRGREELPYSNGNGLRERRRSRS 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01868 182 ProSiteProfiles Zinc finger CCHC-type profile. 92 107 IPR001878 GO:0003676|GO:0008270
Bach3g01868 182 CDD RRM_SRSF3_like 3 71 - -
Bach3g01868 182 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 4 61 IPR000504 GO:0003723
Bach3g01868 182 MobiDBLite consensus disorder prediction 65 182 - -
Bach3g01868 182 SUPERFAMILY Retrovirus zinc finger-like domains 85 109 IPR036875 GO:0003676|GO:0008270
Bach3g01868 182 Pfam Zinc knuckle 92 107 IPR001878 GO:0003676|GO:0008270
Bach3g01868 182 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 2 161 - -
Bach3g01868 182 SUPERFAMILY RNA-binding domain, RBD 3 87 IPR035979 GO:0003676
Bach3g01868 182 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 2 73 IPR000504 GO:0003723
Bach3g01868 182 FunFam Serine/arginine-rich splicing factor RSZ22A 89 149 - -
Bach3g01868 182 FunFam Serine/arginine-rich splicing factor 7 2 69 - -
Bach3g01868 182 MobiDBLite consensus disorder prediction 97 112 - -
Bach3g01868 182 SMART rrm1_1 3 69 IPR000504 GO:0003723
Bach3g01868 182 Gene3D - 1 73 IPR012677 -
Bach3g01868 182 Gene3D - 87 145 - -
Bach3g01868 182 SMART c2hcfinal6 92 108 IPR001878 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01868 Bach-Chr3 26844035 26846666 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01868 2 60 Eukaryotic Initiation Factors Gene Family AT2G36660 38.095 5.99e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01868 K12896 - pvy:116134871 215.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach3g01868 3 26844035 26846666 Bach3g01868 3 26844035 26846666 ECH