Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01805 ATGTCCAGCATCTTGTTTGTGCCTCTCTTTAAGAACCGTTTGTTAGTGTTCGTTATGGTTCTTTATTTGCTCTTGAATGTGAATGAAGCCCAAGGCAAAACAGAGCCACAGGCCATGCCAGAGATTCCCCAACCAATCCGTCCCAGCAAGGGAACTGTAATAGTGATACTCTCTGTAATGTTTGGGCTGTCTTTTCTCCTACTTGCCTATGTCAAGTTCTGTCGAAGCAGACCTCATGAAATTCTGAACCGAGACACCCATCTCCAGAATATTGAAGGGCTTACTCGATCAGCGTCTAGAAATTCTGGGATTGACAAGCGAGTAATTGAGACGCTTCCAATTTTCAAGTTTTCTTCACTGAAGGGATCAAAAGAAGGACTTGAATGTGCTGTTTGCCTGTCTGAATTCGAAGATACTGAGGTTCTCAGATTGTTGCCAAAGTGCAAGCATGCTTTCCACATTAATTGCATTGATAAGTGGCTTGAAGGTCACAGCTGCTGCCCTATTTGCAGGTACAAGGTGGACCCAGGGGACATCAACAACTTCACTTACTCAATCAGCTCAAGGTACCTGAAAGTCCCTTCAAATTTAACAGAGGACCCAAATCTTGAAATCTTTGTACAGAGGGAGCAAGATCATCTAGGGTCGTCAAGATTTAACGTTGGAAACATCTTTTGTAATGTGAGCAAGAGCCAGGGACAAGAACTGCTTATTGATCATGGAGGTGATCTTAATTGGAAACCTGTGCACAAGTTCAATCACAGAATAGTCATATCTGATTTTGTAACTAGGACCAGATGGAGTGATCTTAATTCTTCAGACTTATTATCCTTAAACACTGAGATGCTCAATGTTATGTCAAGCACAAGATTCTCTCCGTTGGAATCGCCTAACATGGTTCAGTTCCACAGAAGTTCAAGCCATCCAACTAGTTCCAATGAGGAAGAAAATTCATTTACTCTACTGAATCTTGGTGAGAAGAGATCCATGTCGGAGATTGCAAATGTTCCAAGGTTTGCGGAAATCAGCACACACAACAGAATAAAACGAGTGGAATCTAGCCGAGAAGAGAGATTGAGGAGGATTTGGTTGCCAATTGTGTGGCGAACAGTGCAATGGTTTGCCTTACGAGACAGAACCTCAACACAATCACAACACAAACGATTGGCAGCAAACGTATGA 1182 0.4255 MSSILFVPLFKNRLLVFVMVLYLLLNVNEAQGKTEPQAMPEIPQPIRPSKGTVIVILSVMFGLSFLLLAYVKFCRSRPHEILNRDTHLQNIEGLTRSASRNSGIDKRVIETLPIFKFSSLKGSKEGLECAVCLSEFEDTEVLRLLPKCKHAFHINCIDKWLEGHSCCPICRYKVDPGDINNFTYSISSRYLKVPSNLTEDPNLEIFVQREQDHLGSSRFNVGNIFCNVSKSQGQELLIDHGGDLNWKPVHKFNHRIVISDFVTRTRWSDLNSSDLLSLNTEMLNVMSSTRFSPLESPNMVQFHRSSSHPTSSNEEENSFTLLNLGEKRSMSEIANVPRFAEISTHNRIKRVESSREERLRRIWLPIVWRTVQWFALRDRTSTQSQHKRLAANV 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01805 393 CDD RING-H2_EL5-like 128 171 - -
Bach3g01805 393 SUPERFAMILY RING/U-box 108 176 - -
Bach3g01805 393 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 103 177 IPR013083 -
Bach3g01805 393 SMART ring_2 129 170 IPR001841 -
Bach3g01805 393 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 33 378 - -
Bach3g01805 393 FunFam RING-H2 finger protein ATL43 104 178 - -
Bach3g01805 393 ProSiteProfiles Zinc finger RING-type profile. 129 171 IPR001841 -
Bach3g01805 393 Pfam Ring finger domain 128 171 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01805 Bach-Chr3 26432076 26433257 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01805 36 380 C3H Transcription Factor Family AT2G20030 40.437 1.92e-78 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01805 K10664 - gmx:100803881 403.675