Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01801 ATGAGTGTTGAACCCCAGAATTCTGAAACAGAGAGCAGCTCGAACTCATTCTCTTCTCCACCAGCATCACCAACTTCTCCCTTTTCAAAGGCTAAAACAAAGGACCCAGAATCCAAAAAGGTTAAACGCATTCGAGACTCCAACAAACACCCTGTCTATCGTGGGGTCCGTATGCGCAATTGGGGCAAATGGGTCTCAGAAATCCGTGAGCCGCGCAAGAAATCGCGTATATGGCTGGGCACATTCCCAACCCCTGAAATGGCTGCAAGAGCACATGATGTTGCTGCTTTGAGCATCAAAGGTAACTCGGCCATTCTCAATTTCCCCCAACTAGCTCACTTGATGCCTCGCCCTGACTCACTCGCGCCCCGAGATGTGCAGGCAGCAGCAGCCAAAGCAGCTCAAATGGACAACTTCGACTCCCCCACATCAAAGTCTTCTTCAACATTGTCATCCTCGTCCTCGCTCTCCTCCTTGGTTTCAGCAATGGACTTGTCTACTGCCTCTGATGAATTGAGCGAGATCATAGAGTTGCCCAGATTGGAGACAGATCACGAGACACTTGAGTTGGGGAAGAAGTTTGTGTTTATAGACTCAGGGGATGGGTGGATGTATCAGCCATCATGGTTGCAGAGCATGGAAGATTGTCATACATATATCGTTGATCAGCTTGCAGTGCCACAAAGTGAGGGTTCAACTTGTTTTGACAGTTTGTTGTGGAATTACTAG 729 0.4842 MSVEPQNSETESSSNSFSSPPASPTSPFSKAKTKDPESKKVKRIRDSNKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPQLAHLMPRPDSLAPRDVQAAAAKAAQMDNFDSPTSKSSSTLSSSSSLSSLVSAMDLSTASDELSEIIELPRLETDHETLELGKKFVFIDSGDGWMYQPSWLQSMEDCHTYIVDQLAVPQSEGSTCFDSLLWNY 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01801 242 MobiDBLite consensus disorder prediction 32 50 - -
Bach3g01801 242 SMART rav1_2 52 115 IPR001471 GO:0003700|GO:0006355
Bach3g01801 242 MobiDBLite consensus disorder prediction 132 152 - -
Bach3g01801 242 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 27 185 - -
Bach3g01801 242 SUPERFAMILY DNA-binding domain 52 110 IPR016177 GO:0003677
Bach3g01801 242 MobiDBLite consensus disorder prediction 1 31 - -
Bach3g01801 242 Gene3D AP2/ERF domain 52 110 IPR036955 GO:0003700|GO:0006355
Bach3g01801 242 Pfam AP2 domain 51 101 IPR001471 GO:0003700|GO:0006355
Bach3g01801 242 CDD AP2 53 109 IPR001471 GO:0003700|GO:0006355
Bach3g01801 242 MobiDBLite consensus disorder prediction 1 50 - -
Bach3g01801 242 FunFam Ethylene-responsive transcription factor 2 51 110 - -
Bach3g01801 242 ProSiteProfiles AP2/ERF domain profile. 52 109 IPR001471 GO:0003700|GO:0006355
Bach3g01801 242 MobiDBLite consensus disorder prediction 137 152 - -
Bach3g01801 242 PRINTS Ethylene responsive element binding protein signature 53 64 IPR001471 GO:0003700|GO:0006355
Bach3g01801 242 PRINTS Ethylene responsive element binding protein signature 75 91 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01801 Bach-Chr3 26410898 26411626 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01801 21 221 AP2-EREBP Transcription Factor Family AT5G11590 62.621 3.25e-70 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bach3g01801 AP2 2.6e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01801 K09286 - qsa:O6P43_015497 298.901