Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01792 ATGGAGGCACCAGAGTTCTTCCAGAACAGCTTTTGCTCACAATTCCCTTCTGATAACAAACCAACCACCGCCCCTGCCGTTGGCGTTGCCGACCATTTCATCGTTGAGGACCTCCTTGACTTCCCCAACGATGACGCCATCATCACGGACGGTGCCTTTGACTCCATTCCCGGCAATTCTGTCGATTCTTCTGTAACCGCCGCTGATAGTTGCATTAATTCCCCGGCCTCCTTTTCTGGGTGCGACACCAATTTTGTCGGCGATATTGGATGCCGGAATATCCCCGACGGCTATTTCTACAGTGACCTCGGCGTGCCGCATGATGATGTAAAGGAGCTGGAATGGCTTTCCAATTTCGTGGAGGAATCGTTTTCAAGCGAGGACCTGCAGAAGCTGCAGCTGATATCTGGCATGAAAGCTCAAACCGAAGAAGTGTCAGAAAACCGTGAATTCCAGCCCGAACCAAACCGAAACAACCCAATATTCAACCGGGAAGTGTCGGTTCCGGCCAAGGCTCGCAGCAAGCGGTCCCGTGGCCCCCCATGCAACTGGACCTCGCGCCTTCTCGTCCTCTCGCCAACCACGTCATCTTCGGACCATGACGTCATCATTCCAACACCTGGAAAGAAAGCGGGGAAGCCGGCCCCGAGGAAGAAGGAGAGCGGGGACGGCTCTGGAGGAGACGGGCGCAAGTGCCTGCATTGCGCTACAGATAAGACGCCGCAGTGGAGGACGGGGCCAATGGGCCCTAAAACGCTTTGCAATGCTTGTGGTGTGAGGTACAAGTCGGGTAGATTGGTGCCCGAGTATCGGCCCGCAGCAAGCCCAACATTCGTGCTGACTAAACATTCCAATTCGCACCGGAAGGTCCTGGAGCTCCGACGCCAGAAGGAGATGCTGAGGGCCCACCAGCAGCAGCAGCAACAGTTTCTGCAACAACAGAACATGATTTTCGATATGCCCAACAGTGACGATTACTTGATCCACCAACACTTGGGACCCGATTTCAGGCAGCTCATCTAA 1023 0.5464 MEAPEFFQNSFCSQFPSDNKPTTAPAVGVADHFIVEDLLDFPNDDAIITDGAFDSIPGNSVDSSVTAADSCINSPASFSGCDTNFVGDIGCRNIPDGYFYSDLGVPHDDVKELEWLSNFVEESFSSEDLQKLQLISGMKAQTEEVSENREFQPEPNRNNPIFNREVSVPAKARSKRSRGPPCNWTSRLLVLSPTTSSSDHDVIIPTPGKKAGKPAPRKKESGDGSGGDGRKCLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLTKHSNSHRKVLELRRQKEMLRAHQQQQQQFLQQQNMIFDMPNSDDYLIHQHLGPDFRQLI 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01792 340 SMART GATA_3 226 276 IPR000679 GO:0006355|GO:0043565
Bach3g01792 340 FunFam GATA transcription factor 222 309 - -
Bach3g01792 340 PIRSF Txn_fac_GATA_plant 17 320 IPR016679 GO:0003677|GO:0005634|GO:0045893
Bach3g01792 340 ProSitePatterns GATA-type zinc finger domain. 232 257 IPR000679 GO:0006355|GO:0043565
Bach3g01792 340 Pfam GATA zinc finger 232 265 IPR000679 GO:0006355|GO:0043565
Bach3g01792 340 MobiDBLite consensus disorder prediction 187 202 - -
Bach3g01792 340 ProSiteProfiles GATA-type zinc finger domain profile. 226 262 IPR000679 GO:0006355|GO:0043565
Bach3g01792 340 Gene3D - 227 276 IPR013088 GO:0006355|GO:0008270
Bach3g01792 340 MobiDBLite consensus disorder prediction 213 230 - -
Bach3g01792 340 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 228 290 - -
Bach3g01792 340 MobiDBLite consensus disorder prediction 144 230 - -
Bach3g01792 340 Coils Coil 293 313 - -
Bach3g01792 340 PANTHER GATA TRANSCRIPTION FACTOR 31 307 - -
Bach3g01792 340 CDD ZnF_GATA 231 278 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01792 Bach-Chr3 26343834 26345361 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01792 21 340 C2C2-Gata Transcription Factor Family AT4G32890 49.550 5.86e-96 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Bach3g01792 GATA 3.1e-15 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01792 - - qsa:O6P43_015488 490.345