Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01742 TTTCAACCAATCGAGTTAGGGTTTTCTTCATTGTTATGGGGAGGGGGAAGATCGTGATAAGGAGGATCGACAATTCGACGAGCAGGCAAGTGACGTTCTCGAAGCGAAGGAATGGTTTGCTGAAGAAAGCGAAGGAGCTTGCAATCCTTTGCGACGCTGAGGTTGGAGTTATGATCTTCTCCAGCACTGGCAAGCTCTACGATTTCGCCAGCACCAGCATGAAATCAGTAATTGAACGATACAACAAAGTAAAAGAGGAACATCATCAACTTGGGAGTTCAACCTCTGAAGTAAAGTTTTGGCAAAGGGAGGCAGCAATGTTACGGCAACAATTGCAAAACTTGCAAGAAAGCCACCAGCAAATGATGGGAGAAGAACTTTCAGGTTTGAACATCAAAGAATTACAAAGTTTGGAGAGCCAATTGAAAATTAGCCTCCGGGGTGTCCAAATGAAAAAGGACCAAATTTTAATGGATGAAATAGAGGAATTAGGCCGAAAGGGAGAACTTGTACACCAAGAAAATTTGGAACTGTATAAGAAGGTAAACCTAATTCGTCAAGAAAACACGGAATTAAAAAAGAAGGTCTATGGAACAAGAGATGGGAATGGAATAAACAGAAACTCTGTGCTCACAAATGGTCTAGGCATAGGAGAAGATTTGCAGGTACCCGTGAATCTCCAGCTAAGCCAGCCACATCAACACAGCTATGAGACACCGTCAGGGGCCACAAAATTGGGATTGCAGCTGCATTGATGCATCTACAGGGGATGTATGTTTCTAGATTGCTATCAACAAAATGGTCTTAGATTTTAATTTTATGCTTTTTTATGGTGAGGTGTGGCAAGTAGGCCAAAAACTATTCAGCTCAAGAATTTCTACTTGAAATTATCAACAAAAGCACCTCAGCAAGTGTTTTATAAACAAGGAACATAGTATCCTATGGAAAGCTGAGACTGAATAAACTGAGAAATTTTTCAGATTGTACAGGTGTGAAATGCATTTTATGTTTTTTACAGTG 1020 0.4059 MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVMIFSSTGKLYDFASTSMKSVIERYNKVKEEHHQLGSSTSEVKFWQREAAMLRQQLQNLQESHQQMMGEELSGLNIKELQSLESQLKISLRGVQMKKDQILMDEIEELGRKGELVHQENLELYKKVNLIRQENTELKKKVYGTRDGNGINRNSVLTNGLGIGEDLQVPVNLQLSQPHQHSYETPSGATKLGRLQLH 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01742 240 SUPERFAMILY SRF-like 2 89 IPR036879 GO:0003677|GO:0046983
Bach3g01742 240 ProSitePatterns MADS-box domain signature. 3 57 IPR002100 GO:0003677|GO:0046983
Bach3g01742 240 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Bach3g01742 240 CDD MADS_MEF2_like 2 78 IPR033896 GO:0000977|GO:0045944
Bach3g01742 240 Gene3D - 13 115 IPR036879 GO:0003677|GO:0046983
Bach3g01742 240 ProSiteProfiles K-box domain profile. 86 176 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bach3g01742 240 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677|GO:0046983
Bach3g01742 240 Pfam K-box region 82 170 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bach3g01742 240 Coils Coil 86 113 - -
Bach3g01742 240 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Bach3g01742 240 PANTHER SERUM RESPONSE FACTOR HOMOLOG 3 222 - -
Bach3g01742 240 MobiDBLite consensus disorder prediction 219 240 - -
Bach3g01742 240 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Bach3g01742 240 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Bach3g01742 240 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Bach3g01742 240 FunFam MADS-box transcription factor MADS-MC 13 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01742 Bach-Chr3 25925258 25938343 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01742 1 231 MADS-box Gene Family AT2G22630 60.606 7.03e-94 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-MIKC Bach3g01742 K-box 3e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01742 K09264 - qsa:O6P43_015429 399.823