Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01740 ATGGCGCCATTAGGGGTGCAACTGCATGCTCAAGATCGTCATGTGGTGATGGACAATGGCATATTGAAAGTCACGTTATCAAATCCTGAGGGCATTGTCACAGGAATAGAGTACAATGGCATCAACAATTTGCTTGAAGTTTTGAACGATGAGTCTAATCGAGGGTACTGGGACCTTGTTTGGAGCTCGCCAACGAGTACTGGAACCACGGGCACATTTGATGTGATAAAGGGAACTACTTACAGTGTTATAGTGGAAAATGAGCAACAAGTTGAGCTATCCTTCAAAAGAACGTGGGATGCCTCCCTTGATGGCAAGCAGGTTCCCTTAAATATTGATAAAAGGTTTATTATGCGTCGTGGTTCATCTGGCTTCTACTCGTATGCTATTTATGAGCACTTGGAGGAATGGCCTGCTTTCAATCTTGATGAAACCAGAATTGCTTTCAAGCTCAGAAAAGACAAGTTTCATTATATGGCAATGGCAGATAATAGGCAAAGAAACTTGCCTTTCCCAGATGACCGATTGCCGCCAAGAGGCCAAGCCCTTGCCTACCCAGAAGCAGTTCTGCTAGTTAATCCAATTGAACCAGAATTTAAAGGAGAGGTGGATGACAAGTACCAATATTCGTGTGACAACAAAGACAGTAGCGTCCATGGGTGGATCTGTATGAACCCAGGAGTGGGATTCTGGCTCATAACGCCCAGCAATGAATTCAGATCTGGTGGACCCGTTAAACAGAACTTAACCTCCCATGTGGGGCCCACCACCCTTGCTGTGTTTCTGAGTGCTCACTACAGTGGAGAGGATTTGGTGCCAAAATTCAAAGCTGGTGAGCCATGGAAGAAAGTTTTTGGTCCAGTTTTCATCTACCTCAATTCTGCATTTGAAGGAGACGACCCACTTAAGCTATGGGATGACGCTAAACTTCAGATGCTGACAGAAGTTCAGAGCTGGCCATACAGTTTTCCTGCTTCAGAGGATTTCCCTAAGTGGGATGAACGTGGTTGTGTTAATGGTCGCCTACTGGTCCGAGACAGGTATATTAGTGATGACTATATACCAGCAAAAGGTGCTTATGTTGGCTTGGCTCCACCTGGAGACGTTGGATCATGGCAAAGAGAATGCAAGAATTATCAGTTCTGGAGTAAAGCAGATGATGATGGCTATTTTTCCATCGCCAATATACATGCCGGTGACTATAATATATATGCATGGGTACCTGGTTTTATAGGCGATTATCGGAATGATGTTGTTATGACCATAACAGCAGATTCATACATCGACGTGGGTGAGCTTGTATATGAACCTCCAAGAGATGGCCCAACATTGTGGGAAATAGGCATCCCTGATCGCTCAGCTGCTGAGTTCTACGTTCCCGATCCAAATCCCAGATATATCAACAAACTCTACGTTGATCATCCTGACAAGTTTAGGCAGTATGGACTATGGGAAAGATATGCAGAATTATACCCTGATAAAGACTTGGTTTACACTGTTGGTGCAAGTGACTTCACCAAAGATTGGTTCTTTGTTCAAGCAACAAGGAAGAAAGACGATAAAACATATCAAGGAACCACATGGCAAATCAAGTTCACGCTTGACAAGGTAGACAAAAAAGCTACCTATATATTACGGGTGGCTTTGGCATCAGCAACAGCTTCAGAACTGCAGGTACGAGTCAATAATCCAAATGCAAATCGTCCTTTATTCTCAAGTGGGTTTATAGGAAAGGATAACTCAATTGCTAGGCATGGAATCCACGGGCTGTATTGGCTTTACAGTGTGAATATACCAATTACTATACTTGTTGAGGGAGATAATTCCATCTTTCTGACACAGTCAAGAGGCAACAGTCCATTTCAGGGGATTATGTATGATTATATTCGTTTAGAAGGTCCCCCAAGCGTCTAG 1914 0.4357 MAPLGVQLHAQDRHVVMDNGILKVTLSNPEGIVTGIEYNGINNLLEVLNDESNRGYWDLVWSSPTSTGTTGTFDVIKGTTYSVIVENEQQVELSFKRTWDASLDGKQVPLNIDKRFIMRRGSSGFYSYAIYEHLEEWPAFNLDETRIAFKLRKDKFHYMAMADNRQRNLPFPDDRLPPRGQALAYPEAVLLVNPIEPEFKGEVDDKYQYSCDNKDSSVHGWICMNPGVGFWLITPSNEFRSGGPVKQNLTSHVGPTTLAVFLSAHYSGEDLVPKFKAGEPWKKVFGPVFIYLNSAFEGDDPLKLWDDAKLQMLTEVQSWPYSFPASEDFPKWDERGCVNGRLLVRDRYISDDYIPAKGAYVGLAPPGDVGSWQRECKNYQFWSKADDDGYFSIANIHAGDYNIYAWVPGFIGDYRNDVVMTITADSYIDVGELVYEPPRDGPTLWEIGIPDRSAAEFYVPDPNPRYINKLYVDHPDKFRQYGLWERYAELYPDKDLVYTVGASDFTKDWFFVQATRKKDDKTYQGTTWQIKFTLDKVDKKATYILRVALASATASELQVRVNNPNANRPLFSSGFIGKDNSIARHGIHGLYWLYSVNIPITILVEGDNSIFLTQSRGNSPFQGIMYDYIRLEGPPSV 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01740 637 Pfam Polysaccharide lyase family 4, domain II 357 428 IPR029413 -
Bach3g01740 637 Pfam Rhamnogalacturonate lyase family 6 203 IPR010325 -
Bach3g01740 637 CDD RGL4_C 445 632 - -
Bach3g01740 637 FunFam Rhamnogalacturonate lyase B 331 430 - -
Bach3g01740 637 CDD RGL4_M 334 433 IPR029413 -
Bach3g01740 637 Pfam Polysaccharide lyase family 4, domain III 443 631 IPR029411 -
Bach3g01740 637 SUPERFAMILY Starch-binding domain-like 355 430 IPR013784 GO:0030246
Bach3g01740 637 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 10 635 - -
Bach3g01740 637 SUPERFAMILY Galactose mutarotase-like 12 294 IPR011013 GO:0003824|GO:0005975|GO:0030246
Bach3g01740 637 CDD RGL4_N 8 304 - -
Bach3g01740 637 Gene3D - 441 632 - -
Bach3g01740 637 Gene3D - 335 430 - -
Bach3g01740 637 SUPERFAMILY Galactose-binding domain-like 440 632 IPR008979 -
Bach3g01740 637 Gene3D - 5 306 IPR014718 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01740 Bach-Chr3 25908094 25912687 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01740 1 634 Polysaccharide Lyase AT1G09890 70.912 0.0 947
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01740 K18195 - gmx:100793563 1154.43