Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01739 ATGTCATCCCCAGGAGTGCGATTGGATATTCAAGAGAAACATGTTGTAATGGATAATGGCATAGTCCAAGTGACTTTATCAAACCCGGAAGGAATTGTGACCGGAATCCAATATAATGGGATCGACAATTTGCTCGAAATCGTTAATCAGGAATTTGACAGAGGATACTGGGATCTTGTTTGGGATGAAGCTGGGAAAAGCGGGACAAAGGGTAGATTCGATAGGATGGAAGCCTCAAACTTTACAGTAATAGTGGAAAATGACGAACAAGTCGAGCTCTCATTCACCAGAATGTGGGTTCCATCCCTCGAGGGAGAGCTTGCGCCCCTCAATATAGATAAAAGGTTTATAATGCTTAGATGTTCCTCTGGCTTCTACACGTATGCTATCTTTGAGCATTTGAAGGAATGGCCTGCTTTCAATCTTGATAACACTAGAATCGCTTTCAAGCTTAGGAAAGACAAGTTCCACTACATGGTGATCGCAGACGACAGACAAAGATTTATGCCTCTGCCTGATGACCGGTCACCGGAAAGGGGACGAGCACTAGCCTACCCAGAGGCTGTCCTGCTTGTCAATCCTGTGGAGCCCGAGTTCAAAGGAGAGGTAGACGACAAGTACCTATACTCATCCGAGAGCCGATACAATAGGGTTCATGGCTGGATATGCATCGATCAATTAGTGGGCTTCTGGCTAATTACACCCAGCTACGAGTTCCGATCCGCTGGACCCCTCAAGCAATACCTTACCTCCCACGTGGGACCCACCACCCTCTCTGTATTTCATAGCACGCATTACTCGGGAGAAGATCTGGTAATGAAATTTGGGACCAATGAGCCATGGAAGAAAGTCTTTGGACCCATATTTATATACCTTAATTCTTTAATAAAAGGTGAAAATCCGCTTCAGCTCTGGAAGGACGCTAAACAACAGATGGTCAATGAAATTGAAAGCTGGCCATATGCTTTTCCAGCTTCGGAAGACTTTCCCTCATCTGATCAAAGGGGCAAAGTTAAAGGTAGATTACTTGTCCGAGATAGGTATATCAGTGATGCACGCATCCCAGTAAATGGAGCTTATGTGGGATTAGCACCCGCAGGAGATGTTGGATCTTGGCAAAGAGAATGCAAGGGTTATCAATATTGGACCACTACTGATGAAAAAGGTTATTTCTCAATCATTGACATACGTGCTGGGGACTATAATCTGTACTCCTGGGTCGCTGGATATATTGGCGATTACCGATATGAAAATGTCATTAACATAACATCAGACTGTGAAATTGATTTGGGAGAACTTGTTTATGAGCCTCCAAGAGATGGCCCTACATTGTGGGAAATAGGCATCCCTGATCGCTCTGCAGCTGAATTCTACATTCCAGATCCGAATCCAAAGTACATTAACAGACTCTACATAAATCATCCAGACAGGTTTAGGCAATACGGATTATGGGATAGATATGCAGATTTGTATCCAAATGAAGACTTAGTTTACACTGTTGGCATCAGTGACTACAGAAAAGACTGGTTTTTTGCTCAAGTTAACAGGATGAAAGACAACAACACATACAAAGGAACCACATGGAAAATCAACTTTAAACTTGATGATGTAAATATAAATGGAACCTACAAATTACGATTGGCCCTGGCATCGGTGCATTCTTCTCTGCTGCAAGTTCGGATAAACAATTCAGAGGCAAACCCACCATTATTTTCAAGTGGAATAATTGGGAAGGAAAACTCCATTGCTAGACATGGAATTCATGGGCTTTACTGGCTATACAGCATTGATATACAAGGTACTCTTCTTGTGGAGGGGAACAATACCATCTTTCTGACACAAGCAAGAAGTACAAGCCCCTTCCAAGGAATCATGTATGATTATATTCGATTAGAAGGCCCCTCTTCTATATCTTGTAAAGATCAGAATTGA 1932 0.427 MSSPGVRLDIQEKHVVMDNGIVQVTLSNPEGIVTGIQYNGIDNLLEIVNQEFDRGYWDLVWDEAGKSGTKGRFDRMEASNFTVIVENDEQVELSFTRMWVPSLEGELAPLNIDKRFIMLRCSSGFYTYAIFEHLKEWPAFNLDNTRIAFKLRKDKFHYMVIADDRQRFMPLPDDRSPERGRALAYPEAVLLVNPVEPEFKGEVDDKYLYSSESRYNRVHGWICIDQLVGFWLITPSYEFRSAGPLKQYLTSHVGPTTLSVFHSTHYSGEDLVMKFGTNEPWKKVFGPIFIYLNSLIKGENPLQLWKDAKQQMVNEIESWPYAFPASEDFPSSDQRGKVKGRLLVRDRYISDARIPVNGAYVGLAPAGDVGSWQRECKGYQYWTTTDEKGYFSIIDIRAGDYNLYSWVAGYIGDYRYENVINITSDCEIDLGELVYEPPRDGPTLWEIGIPDRSAAEFYIPDPNPKYINRLYINHPDRFRQYGLWDRYADLYPNEDLVYTVGISDYRKDWFFAQVNRMKDNNTYKGTTWKINFKLDDVNINGTYKLRLALASVHSSLLQVRINNSEANPPLFSSGIIGKENSIARHGIHGLYWLYSIDIQGTLLVEGNNTIFLTQARSTSPFQGIMYDYIRLEGPSSISCKDQN 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01739 643 Gene3D - 441 632 - -
Bach3g01739 643 CDD RGL4_C 445 632 - -
Bach3g01739 643 Pfam Polysaccharide lyase family 4, domain III 443 631 IPR029411 -
Bach3g01739 643 Pfam Polysaccharide lyase family 4, domain II 357 429 IPR029413 -
Bach3g01739 643 SUPERFAMILY Starch-binding domain-like 332 423 IPR013784 GO:0030246
Bach3g01739 643 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 11 635 - -
Bach3g01739 643 CDD RGL4_M 334 433 IPR029413 -
Bach3g01739 643 FunFam Rhamnogalacturonate lyase B 331 430 - -
Bach3g01739 643 Gene3D - 8 287 IPR014718 GO:0030246
Bach3g01739 643 Pfam Rhamnogalacturonate lyase family 8 203 IPR010325 -
Bach3g01739 643 SUPERFAMILY Galactose-binding domain-like 440 632 IPR008979 -
Bach3g01739 643 Gene3D - 331 425 - -
Bach3g01739 643 CDD RGL4_N 14 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01739 Bach-Chr3 25901402 25905331 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01739 6 635 Polysaccharide Lyase AT1G09890 67.508 0.0 893
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01739 K18195 - gmx:100786488 1102.04