Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01732 ATGTCTTCATCAATACAAGAAGAGAGCTACGAAATTGTCTTGGCGCGTTTAGGTTTAGGGCTTCTTCGGAATTCGCTATGGAAACGATGTTTGATCGATGGAACAGTTGACAAGCTTAGGGCTTTGGTTCTGGTACAGTTCGCGCCCTGTGTGGATTTTGGAGGGAAATTGATGGCGGCGGTGAACTCAGAGCCTCTTCAGGCGCGTGCATTCGAGGAACATGGGAGAGGCCCGATAACGATCGAGGACGATGACGGTGGATATGAGGATTGTGGTGGGAGTGGTGATGCTACGGATGAGGTGGAAGAGGTAAACAATAATTCAGTCAGTGTTGCTGACCATGGGGGAGTTGTTATGGCGTCTCGTACTAGTGAGCTAACACTTTCTTTCGAGGGCGAGGTTTACGTGTTTCCTGCTGTGACTCCTGAAAAGGTGCAAGCAGTTTTGCTTCTTTTGGGTGGTCGTGATGTGCCAATGGGTGTGCCTACGGTTGAAGTACCGTTTGATCAAAGTAACAGGGGCATCTGTGACACTCCAAAGCGTTCAAACCTTTCACGAAGAATAGCATCTTTGGTTAGATTTCGGGAAAAACGCAAGGAAAGATGTTTTGACAAGAAAATTAGATACACTGTGCGAAAAGAGGTGGCACAGAGAATGCATCGAAAGAATGGACAATTTGCGTCCTTGAAAGACAGTCCAAGTTCATCTAATTGGGATTCTGCACAGAGTTTCCATCAAGATGGCACTTCTCATTCTGAAACTGTACGTAGATGTCAACATTGTGGTGTTAGTGAAAATAATACTCCTGCAATGCGTCGTGGACCAGCTGGACCAAGAACTCTATGTAACGCATGCGGTCTTATGTGGGCAAATAAGGGTACACTGAGAGACCTCAGGAAGGGAGGAAGAACTCCTTCTATTGAGCAAAGTGAATCGGAGACTCCTATTGATGTCAAGCCTACTATTCTGGAAGGAGAATCGCCTGGTGTCCAGGATGAGCAAGGAACATCTCAGGATCCTTCTAAGGCTGTCATTGAAGGATCTAATAACCATGCTATCAACCCAGATGATGTGGAATTACCTGAATCTGCTGAACAGTTCACCTACACTCAGCCATTGGGAATTCGTTCTACAGAAAATGATGATCAGGAACCTCTGGTTGAGCTTTCTAATCCTTCAGATACAGATATTGACATTCCTGGAAATTTTGATTAGAAGGTATCGAGTGCTTCATTTGTCAGGAGTTATATATACTAATTGGTCTGTAGTATATACTTCCTGTACTAATGAGATGCGGGCCTTGAGGCAATGCCTCGTTGAAAGATAAATAGAAATTGTGGCTGAGTTATGGACCTATGGTTCACTATAACGAACACAAATCAAATTGTCATTACCAAGTCTAGGGAAGCATTGCTATTCCAGCCAAAAGTTCTTCAACGTCGATTTCAGTGCCGAAATTGTGTTTGTGTAGAAGTTGTCAGATGATCTGCCTTTAGTGGTTTTACCATGAAAACCGCAATTTGTTAGCTAGGCTCTTGGACTTATTTCAATGTTGCCTGATTTATCCGTAATTATAATTTTCGAAAAATGAAAGGTGAGTCTGATTTTAGATATAGATCTTCAGCGATATACGGTGTGCCAAGGACGGGCCATCCTTATTCCTTGCAGCTATTAGTGGTGTGACGATTACCATATTTGATGAGCTGTGTATATGCTGCTGTGCTTTGGGTCTGAACCGTGGAATAAGTGTTTTTAATCTGC 1761 0.4355 MSSSIQEESYEIVLARLGLGLLRNSLWKRCLIDGTVDKLRALVLVQFAPCVDFGGKLMAAVNSEPLQARAFEEHGRGPITIEDDDGGYEDCGGSGDATDEVEEVNNNSVSVADHGGVVMASRTSELTLSFEGEVYVFPAVTPEKVQAVLLLLGGRDVPMGVPTVEVPFDQSNRGICDTPKRSNLSRRIASLVRFREKRKERCFDKKIRYTVRKEVAQRMHRKNGQFASLKDSPSSSNWDSAQSFHQDGTSHSETVRRCQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKGTLRDLRKGGRTPSIEQSESETPIDVKPTILEGESPGVQDEQGTSQDPSKAVIEGSNNHAINPDDVELPESAEQFTYTQPLGIRSTENDDQEPLVELSNPSDTDIDIPGNFD 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01732 404 SMART tify_2 119 154 IPR010399 -
Bach3g01732 404 MobiDBLite consensus disorder prediction 296 404 - -
Bach3g01732 404 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 252 302 - -
Bach3g01732 404 MobiDBLite consensus disorder prediction 330 348 - -
Bach3g01732 404 ProSitePatterns GATA-type zinc finger domain. 258 285 IPR000679 GO:0006355|GO:0043565
Bach3g01732 404 Pfam GATA zinc finger 258 294 IPR000679 GO:0006355|GO:0043565
Bach3g01732 404 Gene3D - 249 312 IPR013088 GO:0006355|GO:0008270
Bach3g01732 404 ProSiteProfiles CCT domain profile. 187 229 IPR010402 GO:0005515
Bach3g01732 404 PANTHER GATA TRANSCRIPTION FACTOR 28 62 397 IPR045280 GO:0006355
Bach3g01732 404 MobiDBLite consensus disorder prediction 364 390 - -
Bach3g01732 404 Pfam CCT motif 187 228 IPR010402 GO:0005515
Bach3g01732 404 SMART GATA_3 252 305 IPR000679 GO:0006355|GO:0043565
Bach3g01732 404 MobiDBLite consensus disorder prediction 227 255 - -
Bach3g01732 404 CDD ZnF_GATA 257 301 IPR000679 GO:0006355|GO:0043565
Bach3g01732 404 ProSiteProfiles Tify domain profile. 119 154 IPR010399 -
Bach3g01732 404 MobiDBLite consensus disorder prediction 222 255 - -
Bach3g01732 404 Pfam tify domain 122 153 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01732 Bach-Chr3 25831990 25841288 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01732 71 300 Tify Gene Family AT1G51600 49.593 1.32e-67 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Bach3g01732 CCT 1.6e-13 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01732 - - qsa:O6P43_019551 532.332