Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01731 ATGTACGGTCACGCTCCGGCAGTGAATATGCCCAGCCAGATCGGTGCCGGCGAAGACGACGATGGTTCAGGCGCGGGCGCTGAGTCGATTGAAAACCAGCACATTCATTATGAACATGCTCTTGAAGATGGTAACGGTGGAATTGGTGGCGTGGTTGAAGATGTTACATCCGATGCTGTATATGCACCTGCCAGTACTGGTGATGCCAGCCAGCTTACTCTTTCGTTTCGTGGCCAAGTCTATGTTTTTGACTCTGTTACACCTGATCAGGTTCAAGCGGTATTGTTACTGTTGGGGGGTTGTGAACTTTCCTCGGGTTCGCAGTGCGTGGACAGAGCAGCTCAAAATCAGACGGGTGCAATCGATTATCCTGGAAGGTGCAGTCAACCGCAACGAGCAGCCTCATTAAGTAGGTTCCGTCAGAAAAGGAAAGAACGATGCTTTGATAAGAAAGTTAGATATAGTGTACGTCAGGAAGTTGCGCTCAGGATGCACCGTAATAAGGGTCAATTTACTTCATCAAAAAAACAAGAAGGAGCGAATAGTTGGGGCACTGTCCAGGAGTCAGGGCAGGATGAAAGTCAATCAGAAACCTCGTGCACACATTGTGGCACAAGTTCGAAATCTACCCCAATGATGCGGCGAGGGCCATCTGGTCCAAGATCACTTTGCAATGCTTGTGGGCTTTTCTGGGCAAATAGGGGTACTTTGAGGGACCTTTCCAAGAGGAACCAGGAAAATTCTCTGGCACCAGTTGAGCAGGTTGATGGTGAAGTTAATGACTCACAGTGTCCACCTGCGGTCCCCGCACATAACAATCTTGTTACTTTCTCTGATAATGACAACCAAGCTTTAACAGCTGATCGATGAGTTTTCCGGTTACAGAAATCGCCATAGTCAATTGCCTCGAGCATTAGTAGATTTGTGATAATTTCATTCAGCTGGACTTATAGAATGTACAGTTATAGCAATGTCTTCATCAATACAAGAAGAGG 995 0.4704 MYGHAPAVNMPSQIGAGEDDDGSGAGAESIENQHIHYEHALEDGNGGIGGVVEDVTSDAVYAPASTGDASQLTLSFRGQVYVFDSVTPDQVQAVLLLLGGCELSSGSQCVDRAAQNQTGAIDYPGRCSQPQRAASLSRFRQKRKERCFDKKVRYSVRQEVALRMHRNKGQFTSSKKQEGANSWGTVQESGQDESQSETSCTHCGTSSKSTPMMRRGPSGPRSLCNACGLFWANRGTLRDLSKRNQENSLAPVEQVDGEVNDSQCPPAVPAHNNLVTFSDNDNQALTADR 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01731 289 ProSiteProfiles CCT domain profile. 132 174 IPR010402 GO:0005515
Bach3g01731 289 Pfam GATA zinc finger 200 236 IPR000679 GO:0006355|GO:0043565
Bach3g01731 289 SMART tify_2 65 100 IPR010399 -
Bach3g01731 289 MobiDBLite consensus disorder prediction 173 213 - -
Bach3g01731 289 MobiDBLite consensus disorder prediction 1 27 - -
Bach3g01731 289 Gene3D - 190 249 IPR013088 GO:0006355|GO:0008270
Bach3g01731 289 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 194 245 - -
Bach3g01731 289 CDD ZnF_GATA 199 245 IPR000679 GO:0006355|GO:0043565
Bach3g01731 289 Pfam tify domain 69 99 IPR010399 -
Bach3g01731 289 ProSitePatterns GATA-type zinc finger domain. 200 227 IPR000679 GO:0006355|GO:0043565
Bach3g01731 289 MobiDBLite consensus disorder prediction 268 289 - -
Bach3g01731 289 Pfam CCT motif 132 174 IPR010402 GO:0005515
Bach3g01731 289 MobiDBLite consensus disorder prediction 165 219 - -
Bach3g01731 289 ProSiteProfiles Tify domain profile. 65 100 IPR010399 -
Bach3g01731 289 PANTHER GATA TRANSCRIPTION FACTOR 28 17 261 IPR045280 GO:0006355
Bach3g01731 289 SMART GATA_3 194 247 IPR000679 GO:0006355|GO:0043565
Bach3g01731 289 ProSiteProfiles GATA-type zinc finger domain profile. 194 252 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01731 Bach-Chr3 25828647 25832014 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01731 12 288 Tify Gene Family AT4G24470 49.673 1.56e-88 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Bach3g01731 CCT 3.6e-15 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01731 - - pvu:PHAVU_008G182900g 409.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach3g01731 3 25828647 25832014 Bach3g01731 3 25828647 25832014 ECH