Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01717 CCAGTTGATATATATGGGGAAAGGATATTGCAAGTTTCGTTTACTTGTTTCATTGAGTTTAAACTCTCCTTACTCCCTTTGATCTTGTAATGCTATTTCGAAATTCCTGGTCTAATTGTTGGTTGAATTGAGACCTTTACTATTTCGATATCCAACTACTATACGGCAGCATTGGGATTAAAAGGGTAAATTGGCTTTGATCTGTGACGTAATACTGTGCTCATAGCATGACCTTCTCCTTCAGTTCAACATTGGCTTATCCTGGTTCAATGCAATTGGCTCACGACGTCAGGGTCTACAGTAAGAGTAAATGTTGTCGTTTTCATCATAATCCAATGGGTGGTGGTCGATTACATTTGTTTACCATCAATCTCTCGGCACATAGTTCGAGGCAGGATACTTCAGCTCTTCACCTTTTAAGTAAAGTATATGCTCCAGTAAGGCCTTTACCTTCCAGATGTAATGTTTTCTTTTGCCGTTCTGTCCTGTTACCTGGTGGAGCGAGTGGGATTCCATTCACGAAATCTGCTAGTATTTTTTTGACAAGGTCATATGATACTGTAAGTGGAAGCCCTGTTGTGCTTCAATTGATCCCAGCCCTTGGTGTCATTGCTTTTGCTGTTTGTGGTATTGAACCACTCCTACGCGTGGGCAGGGTCTTATTTCTACAAAGGACTGATAGCAGCTGGAAGAAAAGTAGTTCTCATTATATCACGACATCTTATTTTCAACCATTGCTGCTGTGGACTGGGGCAATGCTTGTCTGCAGGGCTTTTGATCCACTGGTCCTACCGTCAGAATCCAGTCAGGTTGTAAAGCAACGGGTGCTGAACTTTGTGAGATCATTATCAACAGTGCTATCATTTGCCCACTGTGTACAAAGCTTAATTCAACAAGCACAAAAATTCTTTATGGAAGCAAAAGACTCCAGTGATGCCAGAAATATGGGTTTTGATTTTGCTGGGAAAGCTGTATATACTGCTGTTTGGGTTGCTGCAGTGTCATTGTTCATGGAATTGCTAGGCTTTTCTACACAGAAGTGGTTAACTGCTGGTGGTTTGGGCACAGTGTTGCTCACCCTTGCAGGTCGTGAGATATTTACGAACTTCCTTTCAAGTATGATGATTCATACGACTCGGCCATTTGTTGCGAATGAGTGGATTCAAACAAAGATTGAAGGATATGAGGTTTCTGGCACAGTCGAGCATGTAGGTTGGTGGTCACCAACTATAGTGAGAGGTGACGATCGCGAAGCAGTTCATATTCCAAATCACAAGTTTACTGTTAATGTTGTGCGGAATCTTAGTCAGAAATCTCATTGGCGCATCAAAACTCACCTTGCTATCAGCCACTTGGATGTTAACAAGATTAATAATATTGTAGCTGATATGCGCAAGGTTTTGGCAAAAAATCCTCAAGTAGAGCAGCAAAAGTTGCACAGAAGGGTTTTCTTGGATAATGTCAATCCAGAGAATCAGGCTCTTATGGCATCTCATTTGTCATCTGATGGCGGGAGTGAAGCATATCTTGCATTAATTATACTAATATCTTGCTTTGTGAAAACTTCGCATTTTGAGGAGTATCTTTGTGTCAAGGAGGCAACCATCTTGGATCTTCTCAGAGTTGTCAGTCATCATCGAGCCAGGTTAGCCACACCCATCCGCACAGTTCAGAAAATATACAGTGAAGCTGACGTGGAAAACATACCATTTGGTGATATTTTCACTCGTTCCCGAGAAGCAACAAATCGGCCATTCCTATTGATAGAACCACCTTATAAAGTTAATGGTGAAGATACGATTAAGCCCTCAACCCGTTCATCTCGTACAAACGAGGAAAAAGATGCCAAAATTGAGGAAACGTTGACATCGGATTCTAGAGGAGACGACGATTTTTTAGGGACATCAACCTCTACATCCAGTGCAAACTCCAAGGACAAATTGAATTCAACTTCAGAAGAAGCCCAAACCCAGAATATGGGTGCTGATGGTTCTGTTCAGAAGACCTCTAAAACCTGGCAGCCCAAAAAGGAAAGTGCAGTAGAGGCAGGAAAGGGAACCACCGTTCCATCCGGAAATTCCCCAGTTACTTCCCATGAGTCTGGCAGGGGAGAGATTTCTTCTGCTATTTCACATGCAAAGCAAGATGAACAGAAATCTGCCATGTCCTCATCATCAGCCAGGCCTTCCTTGGAAGAGAATATTGTTCTTGGTGTTGCTCTAGAGGGCTCAAAACGAACTCTTCCTATTGATGAAGACATGACTCCATCTCCTATCCCTGCGGAGTCACAAGAATTTGCTGTCCAAAGAAATGGGAGTGGACTTTCTCCTATTGGTAATGATAAAAGGGATGGTCACATGTCTACAACTCCGGGTGTCAAACAGAGTGATTAG 2393 0.4246 MTFSFSSTLAYPGSMQLAHDVRVYSKSKCCRFHHNPMGGGRLHLFTINLSAHSSRQDTSALHLLSKVYAPVRPLPSRCNVFFCRSVLLPGGASGIPFTKSASIFLTRSYDTVSGSPVVLQLIPALGVIAFAVCGIEPLLRVGRVLFLQRTDSSWKKSSSHYITTSYFQPLLLWTGAMLVCRAFDPLVLPSESSQVVKQRVLNFVRSLSTVLSFAHCVQSLIQQAQKFFMEAKDSSDARNMGFDFAGKAVYTAVWVAAVSLFMELLGFSTQKWLTAGGLGTVLLTLAGREIFTNFLSSMMIHTTRPFVANEWIQTKIEGYEVSGTVEHVGWWSPTIVRGDDREAVHIPNHKFTVNVVRNLSQKSHWRIKTHLAISHLDVNKINNIVADMRKVLAKNPQVEQQKLHRRVFLDNVNPENQALMASHLSSDGGSEAYLALIILISCFVKTSHFEEYLCVKEATILDLLRVVSHHRARLATPIRTVQKIYSEADVENIPFGDIFTRSREATNRPFLLIEPPYKVNGEDTIKPSTRSSRTNEEKDAKIEETLTSDSRGDDDFLGTSTSTSSANSKDKLNSTSEEAQTQNMGADGSVQKTSKTWQPKKESAVEAGKGTTVPSGNSPVTSHESGRGEISSAISHAKQDEQKSAMSSSSARPSLEENIVLGVALEGSKRTLPIDEDMTPSPIPAESQEFAVQRNGSGLSPIGNDKRDGHMSTTPGVKQSD 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01717 721 Gene3D - 306 361 IPR023408 -
Bach3g01717 721 Gene3D - 171 304 - -
Bach3g01717 721 MobiDBLite consensus disorder prediction 529 551 - -
Bach3g01717 721 MobiDBLite consensus disorder prediction 552 600 - -
Bach3g01717 721 MobiDBLite consensus disorder prediction 518 656 - -
Bach3g01717 721 MobiDBLite consensus disorder prediction 610 629 - -
Bach3g01717 721 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 13 713 IPR045042 -
Bach3g01717 721 MobiDBLite consensus disorder prediction 670 721 - -
Bach3g01717 721 MobiDBLite consensus disorder prediction 686 700 - -
Bach3g01717 721 Pfam Mechanosensitive ion channel 247 470 IPR006685 GO:0016020|GO:0055085
Bach3g01717 721 SUPERFAMILY Sm-like ribonucleoproteins 290 360 IPR010920 -
Bach3g01717 721 MobiDBLite consensus disorder prediction 635 655 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01717 Bach-Chr3 25706288 25712036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01717 8 692 Mechanosensitive Ion Channel Family AT1G58200 53.638 0.0 724
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01717 K22047 - gmx:100796022 1003.05