Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01714 ATGGCGAGGGAGAAGATCAAGATCAAGAAAATTGACAACGTAACAGCGAGGCAGGTAACTTTCTCAAAGAGGAGGCGTGGGCTCTTCAAGAAAGCTCAAGAGCTTGCTGTGCTGTGTGATGCTGAGGTTGGTCTCGTTGTTTTCTCTGCTACTGGCAAGCTCTTTGATTATGCCAGCTCCAGTATGAAAGATATTATTACAAGGTATGAGCTGCACTTTCAAGACGTTAACAAAATGGGCAGACCTTCTCTTGTGCTGCAGCTAGAGAATAGCAACAATATCAAATTGAGCAAGGAATTTGCTGAGAAAACCCGCCAAATAAGGCAAATGAAAGGTGAGGATCTTCAACGGCTAAGCTTTCAAGAGCTGCAGGAACTAGAGAAATTGCTTGAAACTGGACTTAGCCGTGTGATTGAGACAAAGGATGAACGGATTGCGAATGACATCATTGCACTGCGGCAAAAGGGAATCCAATTGGCAGAAGAGAACGAGAGGTTAAAGCGAAAGGTGGAGATGTGGGATAAAGGAAAAGGACCTGTCTTGATGGATTCCGATTTTGCCATACAGCAGGAAGAAGGTGTCTCATTCTCAGAATCCCCGACGACGACCAACACTGGCAGCTGCATTACTGGCCCTCCTCCAGAAGATGATTCATCTGATACATCTCTCAAGCTAGGGTAATTAATT 687 0.4498 MAREKIKIKKIDNVTARQVTFSKRRRGLFKKAQELAVLCDAEVGLVVFSATGKLFDYASSSMKDIITRYELHFQDVNKMGRPSLVLQLENSNNIKLSKEFAEKTRQIRQMKGEDLQRLSFQELQELEKLLETGLSRVIETKDERIANDIIALRQKGIQLAEENERLKRKVEMWDKGKGPVLMDSDFAIQQEEGVSFSESPTTTNTGSCITGPPPEDDSSDTSLKLG 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01714 226 PANTHER SERUM RESPONSE FACTOR HOMOLOG 3 164 - -
Bach3g01714 226 MobiDBLite consensus disorder prediction 190 226 - -
Bach3g01714 226 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Bach3g01714 226 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Bach3g01714 226 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Bach3g01714 226 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Bach3g01714 226 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Bach3g01714 226 Coils Coil 149 169 - -
Bach3g01714 226 ProSitePatterns MADS-box domain signature. 3 57 IPR002100 GO:0003677|GO:0046983
Bach3g01714 226 Gene3D - 13 80 IPR036879 GO:0003677|GO:0046983
Bach3g01714 226 MobiDBLite consensus disorder prediction 188 226 - -
Bach3g01714 226 FunFam Transcription factor, MADS-box 13 83 - -
Bach3g01714 226 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677|GO:0046983
Bach3g01714 226 ProSiteProfiles K-box domain profile. 86 176 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bach3g01714 226 SUPERFAMILY SRF-like 3 71 IPR036879 GO:0003677|GO:0046983
Bach3g01714 226 CDD MADS_MEF2_like 2 70 IPR033896 GO:0000977|GO:0045944
Bach3g01714 226 Pfam K-box region 92 170 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01714 Bach-Chr3 25687839 25690966 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01714 1 226 MADS-box Gene Family AT4G24540 55.507 2.62e-78 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-MIKC Bach3g01714 K-box 3e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01714 - - tcc:18591803 289.656