Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01711 ATGCTTCCTTTCCGGAGTTTACACAGGTTTGAGAGCTGGTTATTTGATAATAATGGGTGTATTCAAGAACCAAACTCGTTGATCAAGTCCATGGAATTGGAAGGAGGAAAGTCGGTTCTAAGCTCGGCGTCCAAGTTGGAGAGGAAATCAACGGAAGCATGCAAAAGTCACAGGGATGCCGAGAGGAGACGCAGGCAGCGAATCAACGCCCACCTCTCTACTCTACGTACTCTCCTTCCTAACGCAGCCAAGTCAGACAAGGCCTCGTTGCTAGCGGACGTGGTCAAGCACGTGAAGGAGCTGAGGAAACAGGCTGATGACGTGGCGCGTCGTCACGACGGAAGCTTATCGTGCTGTAGCAGCAGCGGAGAGGCCGGGTCGGAGTCTGCAGAAACTGAAACGTGGCCGTTCCCGGGCGAGTCTGATGAGGCAAGTCTGAGTTACTGCGACGATGTTGGCGAAACTAAGCTCATGAAAGCTACGCTCTGCTGTGAGGACCGACCCAATCTGATCAGGGATCTAAACCAGTCAATCCGATCGGTCCGGGCCAAGGCAGTACGAGCAGAGATGATGACGGTTGGTGGGCGGACCAAGAGCGTTGTGGTAATGCAATGGCCTGGTCATGGCGGAGAGAATGATGTAGAAGTACTGGATCGGGCCTTGAAAGCTGTGGTAGAGAATCGGGCTTTAGTGGGTCCCGGGATGGGCCGCGTAGTATTGGGCCACAAACGGGCCCGGGGTAACTATAGTTCGCCTACAGAGGATGATAGCGCCTTCGTCATGTACTCAAATCCACAAGTTTAGGTTTGATGTTCAGAATCCTTAGATGAAAAAACAAGACGAAATGAAACAATCTCTATATGTAAAACTCCCACTAATCTATACTAACATGCTAATACACGCAGTGGCAGTTATTTCTTGTAACACATATCAAATCTACTAGTTCCC 948 0.5042 MLPFRSLHRFESWLFDNNGCIQEPNSLIKSMELEGGKSVLSSASKLERKSTEACKSHRDAERRRRQRINAHLSTLRTLLPNAAKSDKASLLADVVKHVKELRKQADDVARRHDGSLSCCSSSGEAGSESAETETWPFPGESDEASLSYCDDVGETKLMKATLCCEDRPNLIRDLNQSIRSVRAKAVRAEMMTVGGRTKSVVVMQWPGHGGENDVEVLDRALKAVVENRALVGPGMGRVVLGHKRARGNYSSPTEDDSAFVMYSNPQV 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01711 267 SMART finulus 58 107 IPR011598 GO:0046983
Bach3g01711 267 Pfam Helix-loop-helix DNA-binding domain 54 101 IPR011598 GO:0046983
Bach3g01711 267 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 52 101 IPR011598 GO:0046983
Bach3g01711 267 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 56 111 IPR036638 GO:0046983
Bach3g01711 267 Gene3D - 46 113 IPR036638 GO:0046983
Bach3g01711 267 PANTHER TRANSCRIPTION FACTOR BHLH30 32 247 IPR045847 GO:0003700|GO:0006355
Bach3g01711 267 MobiDBLite consensus disorder prediction 119 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01711 Bach-Chr3 25670422 25671485 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01711 31 226 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 36.765 9.52e-30 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bach3g01711 HLH 2.8e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01711 - - aip:107608273 285.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach3g01711 3 25670422 25671485 Bach3g01711 3 25670422 25671485 ECH