Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01689 ATGGAGAGAGAAGACATGGAATTTGACGAGCACGAAGACCAAGAAGAGGAAGAACAGGTGATCCCGGTGCCGCCGCCTGGATACGACTCGCTCGCCAACTTGGGGCGGCCCAAAATGGGTGCCACTGTCGGAGAGGGAACTCCATCCACCATGACAGCTGGCAGGAAAGGCGGGTCCACAGGGATGATCAGGTACAGAGAATGCCAAAAAAATCATGCCGTCAGCATCGGTGGCCACGCCGTAGACGGTTGCGGTGAGTTTATGGCGGCAGGAGAGGAAGGCTCGATCGATGCATTACAATGCGCCGCCTGCAACTGTCACCGGAATTTCCATCGCAAGGAGATCGACGGAGAAATGAGCTCGTTCCAGCAACCAACACCACCGCAGCCGCACCATCAGTACCACCACCAATTCCCGGCTTACTATCGTGCGCCACCGCCGCCGAGCTCTGGGTACCTCCACCACCATCATTTCACAACTCCACCGATGGGGCAGCACCGGCCGTTGGCTCTACCACCTGTTGCAATAGGAGGGGGGATACTGAGGGAAGAGGAAGACATGTCGAATCCGAGTAGCAGCGGTGGAGGTGGCGGTGGTGGGAGTGGAACGAAGAAAAGGTTTAGAACAAAGTTCACACAGGAGCAGAAGGAGAAGATGCTGGAATTTGCAGAACGGCTAGGTTGGAGGATTCAGAAGCACGATGAAGCAGCTGTGGAGCAGTTCTGTGCGGAGACTGGCGTGAAGAGACAAGTACTCAAGGTTTGGATGCACAATAACAAGCACACTCTTGGTAAGAAACCCTAG 804 0.5535 MEREDMEFDEHEDQEEEEQVIPVPPPGYDSLANLGRPKMGATVGEGTPSTMTAGRKGGSTGMIRYRECQKNHAVSIGGHAVDGCGEFMAAGEEGSIDALQCAACNCHRNFHRKEIDGEMSSFQQPTPPQPHHQYHHQFPAYYRAPPPPSSGYLHHHHFTTPPMGQHRPLALPPVAIGGGILREEEDMSNPSSSGGGGGGGSGTKKRFRTKFTQEQKEKMLEFAERLGWRIQKHDEAAVEQFCAETGVKRQVLKVWMHNNKHTLGKKP 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01689 267 MobiDBLite consensus disorder prediction 1 58 - -
Bach3g01689 267 Pfam ZF-HD protein dimerisation region 63 115 IPR006456 -
Bach3g01689 267 NCBIfam homeobox domain, ZF-HD class 204 260 IPR006455 -
Bach3g01689 267 Gene3D - 189 264 - -
Bach3g01689 267 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 52 263 - -
Bach3g01689 267 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 65 114 IPR006456 -
Bach3g01689 267 MobiDBLite consensus disorder prediction 184 205 - -
Bach3g01689 267 FunFam Zinc-finger homeodomain protein 2 195 265 - -
Bach3g01689 267 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 64 115 IPR006456 -
Bach3g01689 267 MobiDBLite consensus disorder prediction 1 19 - -
Bach3g01689 267 SUPERFAMILY Homeodomain-like 191 265 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01689 Bach-Chr3 25517365 25518168 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01689 12 263 ZF-HD Transcription Factor Family AT4G24660 53.725 3.89e-74 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Bach3g01689 ZF-HD_dimer 4.9e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01689 - - pvu:PHAVU_009G037900g 348.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach3g01689 3 25517365 25518168 Bach3g01689 3 25517365 25518168 ECH