Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01676 ATGACCATCCAGAATGATAGTCGTGCCCCAGCGATTCTCAGGTTCAGTTTGTGGAGTTTTGATGATGGTCTCACGTGGTTTGCTATGTTTGTTCTTCTCCTACAGACATCACGGCCGGCCACCGCACAGCTTCCGAATACCCTCTCGCCCCCGCCAGCGGACCCATTTTCGAGGCTTAAATTTGATAAATCCATGGCCATCATCATGGTGATCCTGGTGGTTGTCTTCTTCATCTTGGGATTTCTTTCCGTCTACACTCGCCAATGTGCCGAGCGACGAATCAGAGGAAGACTTGACCTTACCATCCCGATCGGCGGAAGCGGAAGACGATCGCGTGGGGCGGCACGTGGTCTAGACCCGGAAGTCATCGAAACCTTTCCCACATTTATCTACTCCACAGTAAAGGGGCTCAAGATTGGGAGAGGAACCCTAGAATGCGCCGTGTGCTTAAATGAGTTCCAAGATGATGAGACTCTGCGTTTAATCCCAAAATGCAACCATGTCTTCCATCCCGATTGCATAGACATTTGGTTGTCGTCTCACTCCACTTGCCCTGTTTGCAGGGCCAACCTTGTTACCAAACCAGGGGACCTCTCGTCCGTGGCGATTCAGATTCCAGATCATAGTCCCGAACCCGATCGTGTAAGATCCGATTCTGAATTAAGACAACAAAATACGGAGACAATTGAGGTTGGTGACAGTGAGATCAGAGAAGGTGAGTCACCCAAGGTGAATTTCCTTCACAGGAGTCAAACAATGAATCGCAACCAGAACCGGAACCGGCCACCTAGGTCGAGGTCAACAGGGTTTTTATTGGGCAACTTATTTCCACGATCTCACTCGACAGGTCACTCACTGGTTCAACTCGGCGAAAACTGTGAAAGATACACGCTAAGGTTGCCGGAGGAGGTGAGGAATCAGTTACTGAACTCAACCTTGAACCGTACAAAAAGTTGCGTCACCTTTACTAGAGTGAGTAGCGAGAGGAGGGGTTACAGGGCTAGAAGCTTGGGCAGCGGGCATGGTAGAAACCATATGCAGTACGATCGGCTCGGTAGTGAGGGGCGGTCGGACGGGTGGGGGTTCGCCTTGACGCCGCCGTTTTTTGCTAGAACCGGTTCGAGTACGTCAGTAAAGGTCTCAAAGGGGTCTGACAAAACTACATTTGAACATTCGGGAAGGGCAATGGACAACGAGGGGGAGCGATCCTCTGATCGGTTATGTCCAGGCTCAGCAACAGCAATTCAAGATTAG 1254 0.5072 MTIQNDSRAPAILRFSLWSFDDGLTWFAMFVLLLQTSRPATAQLPNTLSPPPADPFSRLKFDKSMAIIMVILVVVFFILGFLSVYTRQCAERRIRGRLDLTIPIGGSGRRSRGAARGLDPEVIETFPTFIYSTVKGLKIGRGTLECAVCLNEFQDDETLRLIPKCNHVFHPDCIDIWLSSHSTCPVCRANLVTKPGDLSSVAIQIPDHSPEPDRVRSDSELRQQNTETIEVGDSEIREGESPKVNFLHRSQTMNRNQNRNRPPRSRSTGFLLGNLFPRSHSTGHSLVQLGENCERYTLRLPEEVRNQLLNSTLNRTKSCVTFTRVSSERRGYRARSLGSGHGRNHMQYDRLGSEGRSDGWGFALTPPFFARTGSSTSVKVSKGSDKTTFEHSGRAMDNEGERSSDRLCPGSATAIQD 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01676 417 Pfam Ring finger domain 145 188 IPR001841 -
Bach3g01676 417 CDD RING-H2_EL5-like 145 188 - -
Bach3g01676 417 MobiDBLite consensus disorder prediction 373 417 - -
Bach3g01676 417 PANTHER RING FINGER DOMAIN-CONTAINING 50 191 - -
Bach3g01676 417 MobiDBLite consensus disorder prediction 209 223 - -
Bach3g01676 417 ProSiteProfiles Zinc finger RING-type profile. 146 188 IPR001841 -
Bach3g01676 417 MobiDBLite consensus disorder prediction 245 267 - -
Bach3g01676 417 SUPERFAMILY RING/U-box 140 196 - -
Bach3g01676 417 MobiDBLite consensus disorder prediction 384 404 - -
Bach3g01676 417 MobiDBLite consensus disorder prediction 202 267 - -
Bach3g01676 417 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 108 193 IPR013083 -
Bach3g01676 417 SMART ring_2 146 187 IPR001841 -
Bach3g01676 417 FunFam E3 ubiquitin-protein ligase ATL6 107 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01676 Bach-Chr3 25421681 25422934 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01676 29 380 Rapid Response to Elicitors AT3G05200 40.449 1.11e-71 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01676 K10664 - qsa:O6P43_019600 427.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach3g01676 3 25421681 25422934 Bach3g01676 3 25421681 25422934 ECH