Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01675 ATGGCACTAGAGGCTGTGGTTTTCCCACAAGATCCATTTACTTATAGTTGCAGGGATTTGTACTCTTTATTATCAGCCGGAGGAGGAGGTGTTGGTGGTGGTGGTGGAGCTTGGATTCGTGACTGTGCTAGTCTACAAGTAGAAGAGGACAAAGCCCTTGTTGGAATCATCAACAATAACATAGAGCAGAGTCTGCATGCAAATTGGGATTCCTCTTCTTCTCCTTCTCATTCTGTTTTACAAAATGTTAAGGATCAATGGGACTCCCATTCTTCCCCTGATCAGTCTCTCCCCGGATCAGCTTTATTACCTCCTCCTTCAGTGGAAGCTACTAGAGTGACGACTACAACAACAACAGGTCGGCGCAAACGGCGTCGCACCAAGAGCGCCAAGAACAAGGAGGAAATCGAGAACCAGAGGATGACCCACATTGCAGTTGAGCGCAATCGGCGGAAACAGATGAATGAGTACCTGGCAGTGCTCCGATCCTTGATGCCTCCTTCTTATGTCCAAAGGGGTGACCAAGCCTCTGTAATTGGAGGCGCCATTAACTTCGTTAAGGAACTAGAACAGCTTTTACAGTCTATTGAGGGTCAAAAGAAAATAAAGCAACAACAAGAAGAACCGCAAGGGACAACCTTTAATTCGTCGCTCTTTGCTGAGTTCTTCACATTCCCACAGTACACAAGGCACTGCAACACTTGCTCCTCCACCACAGCAACCACCAACGATACCAATAACATGGCACAGAATCAGTGGGCCGTAGCGGACATAGAAGTCACGATGGTGGACAGCCATGCCAACCTCAAGATACTCTCGAAGAAACGATCGGGTCAGCTTATGAAGTTGGTTGTTGGCCTTCACTCTCTCATGCTCACCATTCTCCATCTTAATGTTACCACTGTTGACCAAATGGTCCTTTACTCGGTCAGCGTAAAGGTCGAAGAAGGGTGTCAGCTGAATACAGTAGATGAGATCGCAGCTGCTGTGAATCAACTGCTACGCAGAATTGAGGAGGAATCTGCTTTCAGCTGATGCTGGAAAAGCGCCTTCCTTTTTTTTTCTTTCCCTTTCTTATTTCGAGAATGATTAGGGATATCTGTCTAATTGAAGGGATGCAATTACGATGATAATGTTGCTCTTATTTAGTTAATTTGTCCAAACGCACCCTCTAATATCATCAATTTATTATCAGAGACAGAGACCCCATTTGAAAATTAAGTAGCTTTCAGCTAAAAGTTGAAAGCTTTTTTCAAGTGTCTGGGTATAAACCTATCAATTAGAGGGTAGTATATTGCTGTTGCTATGTCCCAATCCATCCTTTAATATCACCAACTGTTCAAAGCATTATTATGCTAGTTGAAATGCTTAGTGTCTGCTTGGTGTGGCCGGTCCTCAAGTCATATCTCCCTCAAGCCATGTACATGCAACTTCACCACGAGTCTCAATGCAAATACATGTTAATTCATGTCAATAAGTTATGATCGAGGCTTGGAGTTTTCTTTTTTTCTGTATTCTTATTTTTTTTTACTTGAAAAAGGGAAAGCCGGAGGAGAAGGAGACAACTAATATCTGCAGGCCCTCCTTGCCAGTTGCGTCCATATGTGAATTATTAACGTTGGTAGCAAGATCAATGTATGTGTGAATTATTAACGTTGCTTCCAGACCAT 1670 0.4347 MALEAVVFPQDPFTYSCRDLYSLLSAGGGGVGGGGGAWIRDCASLQVEEDKALVGIINNNIEQSLHANWDSSSSPSHSVLQNVKDQWDSHSSPDQSLPGSALLPPPSVEATRVTTTTTTGRRKRRRTKSAKNKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPPSYVQRGDQASVIGGAINFVKELEQLLQSIEGQKKIKQQQEEPQGTTFNSSLFAEFFTFPQYTRHCNTCSSTTATTNDTNNMAQNQWAVADIEVTMVDSHANLKILSKKRSGQLMKLVVGLHSLMLTILHLNVTTVDQMVLYSVSVKVEEGCQLNTVDEIAAAVNQLLRRIEEESAFS 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01675 344 Pfam Helix-loop-helix DNA-binding domain 139 190 IPR011598 GO:0046983
Bach3g01675 344 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 138 208 IPR036638 GO:0046983
Bach3g01675 344 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 138 189 IPR011598 GO:0046983
Bach3g01675 344 PANTHER MAX DIMERIZATION, MAD 70 340 - -
Bach3g01675 344 Coils Coil 186 206 - -
Bach3g01675 344 CDD bHLH_AtFAMA_like 141 209 - -
Bach3g01675 344 SMART finulus 144 195 IPR011598 GO:0046983
Bach3g01675 344 Gene3D - 128 213 IPR036638 GO:0046983
Bach3g01675 344 MobiDBLite consensus disorder prediction 68 135 - -
Bach3g01675 344 FunFam Basic helix-loop-helix transcription factor 129 204 - -
Bach3g01675 344 MobiDBLite consensus disorder prediction 68 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01675 Bach-Chr3 25401543 25403499 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01675 1 314 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 46.828 2.93e-74 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bach3g01675 HLH 3.6e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01675 - - gmx:100797856 383.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach3g01675 3 25401543 25403499 Bach3g01675 3 25401543 25403499 ECH