Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01671 ATGGCAGTACATCGTCGGCTCTGCTTTTCTTCCGCAACTTACCTCTCTGCAGAAGCCCCTCTCATATCTCTTGCGAATTCTCGACGTCAATCTAACTATTCCATCGATAATCTCTCTTTTTGCCGGCCACCTTCTTCGTTTCAATCTCTAAGTCTCTCACTTGCGCATAGCACCAACTTTAGGAACAAAGAAACCCGTAACTTTGTTCCCAAATTCGCCTCTACCTCCCCGGAGCAAGTGCTTGATTCTTCCCCTGCTAATGTTTATGCTGAGACTCGAGAGACCGAGGCAGAAACTGAAGAATTATCTAAAACCAGGTTGCTTGCTTCCAACGTACCTTGGACTAGTACTCCTGAAGACATTCGTTCTCTGTTCGGGAGGCATGGCAAAGTCGTAGACGTTGAGCTTTCTATGTATAACAAGACCAGAAACAGGGGTTTGGCATTTATCGAAATGGGATCACAAGAAGAGGCTCTTGCTGCTCTCAGTAATCTCGAATCGTATGAGTATGAGGGTCGGACAATAAAAGTCAATTATGCTTTGCCCAAGAAGAAGAAAACTTCACCTCCAGTGCAACCGAAGTCAGTAACATTTAACTTGTTTGTTGCAAATTTGTCCTTTGAAGCGAGGGCAAAACATCTCAAGGAGTTTTTTGAGTCAGGAAGTAGTGGTGTTGTTTCTGCGGAGGTTATATTTCATGATAACCCTAGAAAATCATCTGGCTATGGATTTGTATCCTTCAAGTCCAAGAAAGAAGCTGACACAGCTCTTTCTGAATTCCAAGGGAAGATCTTTATGGGAAGGCCACTAAGGGTGGCACGTAGTCGGCAATTTGTTAAACAACCAGTGGAGGGGAACGAAGGATCTGAAGATGCATCACCTGAGCTGAATCCGAGTGGGGAAAAAGCCAATGATGCTGCTTGA 924 0.4459 MAVHRRLCFSSATYLSAEAPLISLANSRRQSNYSIDNLSFCRPPSSFQSLSLSLAHSTNFRNKETRNFVPKFASTSPEQVLDSSPANVYAETRETEAETEELSKTRLLASNVPWTSTPEDIRSLFGRHGKVVDVELSMYNKTRNRGLAFIEMGSQEEALAALSNLESYEYEGRTIKVNYALPKKKKTSPPVQPKSVTFNLFVANLSFEARAKHLKEFFESGSSGVVSAEVIFHDNPRKSSGYGFVSFKSKKEADTALSEFQGKIFMGRPLRVARSRQFVKQPVEGNEGSEDASPELNPSGEKANDAA 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01671 307 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 105 182 IPR000504 GO:0003723
Bach3g01671 307 MobiDBLite consensus disorder prediction 276 307 - -
Bach3g01671 307 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 200 271 IPR000504 GO:0003723
Bach3g01671 307 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 110 176 IPR000504 GO:0003723
Bach3g01671 307 CDD RRM_SF 200 272 - -
Bach3g01671 307 SUPERFAMILY RNA-binding domain, RBD 105 275 IPR035979 GO:0003676
Bach3g01671 307 SMART rrm1_1 106 178 IPR000504 GO:0003723
Bach3g01671 307 SMART rrm1_1 199 273 IPR000504 GO:0003723
Bach3g01671 307 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 198 277 IPR000504 GO:0003723
Bach3g01671 307 PANTHER OS02G0815200 PROTEIN 32 276 - -
Bach3g01671 307 Gene3D - 57 186 IPR012677 -
Bach3g01671 307 Gene3D - 187 282 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01671 Bach-Chr3 25375917 25377428 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01671 105 294 Eukaryotic Initiation Factors Gene Family AT3G16380 28.436 7.60e-14 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01671 - - qsa:O6P43_015341 343.584