Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01652 ATGAATCAAAATCAGAATGAGATTCAGCCTCTACCTCTGCTAAGCAGCTTCCTTGGTTCAACTCCAAAAGAAGCTATACCTCTAATCACAAATTTACCCAAAGCAAACAATTATGGACGTGATCATGAGAAGGAGGAAGTCACAGTGGCTTTACGCATAGGACTCCCTGACAATTCCAGTAGCTCTGCCAATCCAAATCAAAATGAAAATGCAACCCAAGTACCTAACAACTACTGGATACCGACTCAAGAACAGATTCTCATTGGTTACAGTCATTTTTCTTGTCCTGTTTGCCTCAAAACCTTCAATCGCTACAACAATCTTCAGCAGATGCATATGTGGGGACATGGGTCAGAGTATCGTAAAGGAGCAGACTCGCTGAAACGAGTCCAACCACGACCATTGTTAGAGATTCCATGCTATTGCTGCTCACTAGGGTGCAAGAACAACATAGAGCACCCAAGAGCTAAGCCTCTGAAAGATTTTAGAACATTGCAGACACACTACAAGAGGAAGCACGGTGCCAAGCCCTTTACATGTCACAAATGTGGCAAGCTTTTGGCTGTAAAGGGTGACTGGAGAACCCATGAGAAGAACTGTGGCAAGCGTTGGCATTGTGTTTGTGGTTCTGACTTTAAGCACAATAGATCCCTTAAAGATCATATTAAAGTTTTTGGTTCTGGTCATGCCCCTTTCTCTTCATCTCAGGCCATCTAA 717 0.4324 MNQNQNEIQPLPLLSSFLGSTPKEAIPLITNLPKANNYGRDHEKEEVTVALRIGLPDNSSSSANPNQNENATQVPNNYWIPTQEQILIGYSHFSCPVCLKTFNRYNNLQQMHMWGHGSEYRKGADSLKRVQPRPLLEIPCYCCSLGCKNNIEHPRAKPLKDFRTLQTHYKRKHGAKPFTCHKCGKLLAVKGDWRTHEKNCGKRWHCVCGSDFKHNRSLKDHIKVFGSGHAPFSSSQAI 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01652 238 PANTHER ZINC FINGER PROTEIN WIP2 22 233 IPR043584 GO:0003700|GO:0010468
Bach3g01652 238 ProSiteProfiles Zinc finger C2H2 type domain profile. 93 121 IPR013087 -
Bach3g01652 238 Gene3D Classic Zinc Finger 147 233 - -
Bach3g01652 238 MobiDBLite consensus disorder prediction 55 74 - -
Bach3g01652 238 FunFam Zinc finger protein WIP2 147 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01652 Bach-Chr3 25255323 25256164 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01652 4 235 C2H2 Transcription Factor Family AT1G34790 58.498 1.72e-95 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bach3g01652 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01652 - - ccaj:109809318 386.341