Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01651 ATGGCTTACCCACATTACCGATCACAGTTTGGCGACACAACTTTTACCAAAGTGTTTGTTGGAGGACTTGCTTGGGAGACACCCACTGAAGAAATGCGTAAATACTTCGAGCAGTTCGGAGATATTCTTGAGGCTGTCATCATCATTGATAAGAACTCAGGAAAATCTAAAGGCTATGGATTCGTGACTTTCCGTGATCCAGAATCAGCAAGAAGAGCTTGTGCTGATCCAAACCCTGTAATAGATGGAAGACGAACAAATTGCAATATTGCTTCTCTAGGACGGCCTCGACCTTCTCCTCCCCGAGCTGGTGGGAGTAGCAGCTATAGAGGAGGCACAGCACAGGGTGCCATGTCGTATGGTGGTGCTCCGGCAGCAGTACCTCCGTCACTGCCACCGCCACCACCTCTAATGTACCCAAGTTATAGCTACCCAACCTACGGTCCTGACTATGGGTACCACCAAGCCCCATTGTACAACCCCCAGATGCAGCAGGGACAATACTATCAACAAGTTTATGGACCATCATCTCCCACAATGGGATCGCCATATTACTATGGTTATTCAGTACAAGCAGCAAGGGGCACATTTTCTACGCCCCAACCACATCGCCTACCAGCTGGACCCTCTTATCTTTACTACCCTACTACACCCATGGAAGGCTCCTTCTCTGCTCATCGTCCACCTCAACCACCAACACTAAGCCATCCCTTTCCCTCCCCCACTCCTACTGATTCACAGCCTCAGCAACGTGCCTCCTCAGAAACAGCAGCTGTAGTAGTTATAACTTCAGAGAGTCCAAATACCCAAGGGACGAACTAA 822 0.4927 MAYPHYRSQFGDTTFTKVFVGGLAWETPTEEMRKYFEQFGDILEAVIIIDKNSGKSKGYGFVTFRDPESARRACADPNPVIDGRRTNCNIASLGRPRPSPPRAGGSSSYRGGTAQGAMSYGGAPAAVPPSLPPPPPLMYPSYSYPTYGPDYGYHQAPLYNPQMQQGQYYQQVYGPSSPTMGSPYYYGYSVQAARGTFSTPQPHRLPAGPSYLYYPTTPMEGSFSAHRPPQPPTLSHPFPSPTPTDSQPQQRASSETAAVVVITSESPNTQGTN 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01651 273 PANTHER BOULE-RELATED 6 248 - -
Bach3g01651 273 FunFam RNA-binding protein 24-B isoform X1 3 111 - -
Bach3g01651 273 MobiDBLite consensus disorder prediction 230 244 - -
Bach3g01651 273 SMART rrm1_1 17 89 IPR000504 GO:0003723
Bach3g01651 273 MobiDBLite consensus disorder prediction 245 273 - -
Bach3g01651 273 MobiDBLite consensus disorder prediction 85 115 - -
Bach3g01651 273 MobiDBLite consensus disorder prediction 218 273 - -
Bach3g01651 273 Gene3D - 3 112 IPR012677 -
Bach3g01651 273 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 16 93 IPR000504 GO:0003723
Bach3g01651 273 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 18 75 IPR000504 GO:0003723
Bach3g01651 273 SUPERFAMILY RNA-binding domain, RBD 9 116 IPR035979 GO:0003676
Bach3g01651 273 CDD RRM_RBM24_RBM38_like 16 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01651 Bach-Chr3 25250974 25254090 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01651 12 104 C2H2 Transcription Factor Family AT2G19380 36.559 4.03e-15 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01651 K25006 - gmx:100788516 378.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach3g01651 3 25250974 25254090 Bach12g00748 12 5214076 5217487 BWGD
Bach3g01651 3 25250974 25254090 Bach3g01651 3 25250974 25254090 ECH